Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950795.1_202016-12-27] 17,277 sequences; 65,230,783 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq757 185 1e-41 seq5268 179 4e-40 >seq757 Length=19743 Score = 185 bits (204), Expect = 1e-41 Identities = 408/604 (68%), Gaps = 16/604 (3%) Strand=Plus/Minus Query 146908 AGCTGAATTTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGC 146967 ||||| | || |||||||| || || | ||||| | ||| ||||| || | |||||| Sbjct 19454 AGCTGGACCTTGAGGGGCTCGACATGATCCAGGTAAATGTGAGCGTCGCCAATGGTGTGA 19395 Query 146968 ACAAAGTCCCCCGGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAG 147027 | ||||| |||| | || || || || || || | || || | |||| |||| Sbjct 19394 ATGAAGTCACCCGCCCGCAGCCCTGTAACCTGCGCGATCAGCCGCGTCAAGAGCGCGTAG 19335 Query 147028 CTGGCTATGTTGAAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCAC 147087 || || ||||||||||| || || || |||||||| | || | ||| |||| |||||| Sbjct 19334 CTCGCGATGTTGAAGGGCACACCGAGACCCATGTCGGCTGAGCGCTGATACATCTGGCAA 19275 Query 147088 GAGAGCTCCCCGTCGGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATG 147147 || ||||| ||||| || |||||||||||||| | ||||| || || ||||| ||||| Sbjct 19274 GACAGCTCACCGTCCGCGACGTAAAACTGGCAGAACATGTGACAGGGGGGCAGTGCCATC 19215 Query 147148 GCGGGCAGGTCCGCGGGGTTCCAGGCCGAGACCACCAGCCGCCTGCTCTCGGGGTTCCTC 147207 | || || || |||||||| || || | | | || | | | || ||| || Sbjct 19214 TCCTTGAGATCGGCCGGGTTCCATGCTGACATGATTATGCGACGGTCGTTCGGATTCGTC 19155 Query 147208 TTAATCTCTTCGATAACCCACCTC----AGCTGGTCCACGCCCTGGCCCCCGTAGTTTGT 147263 | || || || || |||||| |||||||| |||||||| ||| |||| | | Sbjct 19154 T---TCAGTTTGAGAA-TCACCTCGGCAAGCTGGTCGACGCCCTGACCCGTGTAG-TCGG 19100 Query 147264 CCCGCA--GTCCACGTACCTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCC 147321 | ||| || | |||| | || || ||||| | |||||||||||||||||| || || Sbjct 19099 CGTGCATCGT-CGTGTACTTTGCGCCGAAGTGGCGCCACTGGAAGCCGTACACCGGTCCG 19041 Query 147322 AGGTCGCCGGGCTTTC--TGTGCGAGAAGCCCGCCCGCTTGAGAAACTCGGGGGACCCGT 147379 ||||| |||| | | || ||||| || | | |||| | || ||||| | Sbjct 19040 AGGTCTCCGGCTTCACGATGACCGAGA--CCAATGCTTTCGAGATATTCCTTTGACCCAT 18983 Query 147380 GGGCGTCCCAGATGCCCACTCCCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGA 147439 | | |||||||| | |||||| | ||| ||| | || ||| || | || Sbjct 18982 TGCCATCCCAGATTTTGATGCCCTTGTCCTGCAGCGTCTTGGCGTTGGTGTCACCACTGA 18923 Query 147440 TGAACCAGAGCAGCTCCTCCAAAACCCCCCTCCAAAAGACCCTCTTGGTGGTCAGCAGGG 147499 ||||||| | ||| ||||| ||| || | ||| || || | ||||| || || || | Sbjct 18922 TGAACCACAACAGTTCCTCTGCAACACCGCGCCAGAACACGCGTTTGGTCGTAAGAAGTG 18863 Query 147500 GGAA 147503 | || Sbjct 18862 GAAA 18859 >seq5268 Length=2107 Score = 179 bits (198), Expect = 4e-40 Identities = 406/604 (67%), Gaps = 16/604 (3%) Strand=Plus/Plus Query 146908 AGCTGAATTTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGC 146967 ||||||| || ||||| || || |||| || || | ||| ||||| || | |||||| Sbjct 92 AGCTGAACCTTGAGGGGTTCGACATGGTCCAGATAAATGTGAGCGTCGCCAATGGTGTGA 151 Query 146968 ACAAAGTCCCCCGGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAG 147027 | ||||| |||| | || || || || || || | || || | || | |||| Sbjct 152 ATGAAGTCACCCGCCCGGAGTCCTGTAACCTGCGCGATCAGCCGCGTCAAGAGTGCGTAG 211 Query 147028 CTGGCTATGTTGAAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCAC 147087 || || ||||||||||| || || || |||||||| | || | ||| |||| |||||| Sbjct 212 CTCGCGATGTTGAAGGGCACGCCGAGCCCCATGTCGGCTGAGCGCTGATACATTTGGCAC 271 Query 147088 GAGAGCTCCCCGTCGGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATG 147147 || ||||| ||||| || |||||||||||||| | |||||||| || ||||| ||||| Sbjct 272 GATAGCTCACCGTCCGCGACGTAAAACTGGCAGAACATGTGGCAGGGGGGCAGTGCCATC 331 Query 147148 GCGGGCAGGTCCGCGGGGTTCCAGGCCGAGACCACCAGCCGCCTGCTCTCGGGGTTCCTC 147207 | || || || |||||||| || || | | | || | | | || ||| || Sbjct 332 TCCTTAAGATCGGCCGGGTTCCATGCTGACATGATTATGCGACGGTCGTTCGGATTCGTC 391 Query 147208 TTAATCTCTTCGATAACCCACCTC----AGCTGGTCCACGCCCTGGCCCCCGTAGTTTGT 147263 || | || || | |||||| |||||||| ||||||||||| |||| | | Sbjct 392 TTCAGCT----TATGAATCACCTCTGCAAGCTGGTCGACGCCCTGGCCGGTGTAG-TCGG 446 Query 147264 CCCGCA--GTCCACGTACCTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCC 147321 | ||| || | |||| | || || ||||| | ||||||||| |||||||| || || Sbjct 447 CGTGCATCGT-CGTGTACTTTGCGCCGAAGTGGCGCCACTGGAAACCGTACACCGGTCCG 505 Query 147322 AGGTCGCCGGGCTTTC--TGTGCGAGAAGCCCGCCCGCTTGAGAAACTCGGGGGACCCGT 147379 ||||| |||| | | || ||||| || | | |||| | || ||||| | Sbjct 506 AGGTCTCCGGCTTCACGATGACCGAGA--CCAATGCTTTCGAGATATTCCTTTGACCCAT 563 Query 147380 GGGCGTCCCAGATGCCCACTCCCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGA 147439 | | |||||||| | |||||| | || ||| | || ||| || | || Sbjct 564 TGCCATCCCAGATTTTGATGCCCTTGTCCTGCAGGGTCTTGGCGTTGGTGTCACCACTGA 623 Query 147440 TGAACCAGAGCAGCTCCTCCAAAACCCCCCTCCAAAAGACCCTCTTGGTGGTCAGCAGGG 147499 ||||||| | ||||||||| ||| || | ||| || || | ||||| || || || | Sbjct 624 TGAACCACAACAGCTCCTCTGCAACGCCGCGCCAGAACACGCGTTTGGTCGTTAGAAGTG 683 Query 147500 GGAA 147503 | || Sbjct 684 GAAA 687 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583361988472800