Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950795.1_202016-12-27] 17,277 sequences; 65,230,783 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq757 93.3 3e-14 seq5268 87.8 1e-12 >seq757 Length=19743 Score = 93.3 bits (102), Expect = 3e-14 Identities = 141/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 41003 CCGACGTATAATATTGTGCGCGTGGAACCCAACGGACGTACATTTGATGGCATTGCCACC 41062 ||| || ||||| ||| || |||||||| | || | | ||||||| |||| || Sbjct 19170 CCGTCGCATAATCATGTCAGCATGGAACCCGGCCGATCTCAAGGAGATGGCACTGCCCCC 19229 Query 41063 TTGTCATTTGTTATGTCAGTTTTACGTTTGCAATGGTGAACTGTCATGTCAATTGTATCA 41122 ||||| |||| || ||||||||||| | ||||| ||||| || || ||||||| Sbjct 19230 CTGTCACATGTTCTGCCAGTTTTACGTCGCGGACGGTGAGCTGTCTTGCCAGATGTATCA 19289 Query 41123 AAGATCAGGTGACATGGGACTAGGGGTCCCGTTTAACATAGCGAGTTATGCTCTGCTCAC 41182 | |||| |||||||| || || || || || ||||| ||||| || || || | || Sbjct 19290 GCGCTCAGCCGACATGGGTCTCGGTGTGCCCTTCAACATCGCGAGCTACGCGCTCTTGAC 19349 Query 41183 GTATATGATTGCACACGTTAC 41203 | |||| || || ||||| Sbjct 19350 GCGGCTGATCGCGCAGGTTAC 19370 >seq5268 Length=2107 Score = 87.8 bits (96), Expect = 1e-12 Identities = 140/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 41003 CCGACGTATAATATTGTGCGCGTGGAACCCAACGGACGTACATTTGATGGCATTGCCACC 41062 ||| || ||||| ||| || |||||||| | || | | ||||||| |||| || Sbjct 376 CCGTCGCATAATCATGTCAGCATGGAACCCGGCCGATCTTAAGGAGATGGCACTGCCCCC 317 Query 41063 TTGTCATTTGTTATGTCAGTTTTACGTTTGCAATGGTGAACTGTCATGTCAATTGTATCA 41122 || || |||| || ||||||||||| | ||||| || || || ||| ||||||| Sbjct 316 CTGCCACATGTTCTGCCAGTTTTACGTCGCGGACGGTGAGCTATCGTGCCAAATGTATCA 257 Query 41123 AAGATCAGGTGACATGGGACTAGGGGTCCCGTTTAACATAGCGAGTTATGCTCTGCTCAC 41182 | |||| |||||||| || || || || || ||||| ||||| || || || | || Sbjct 256 GCGCTCAGCCGACATGGGGCTCGGCGTGCCCTTCAACATCGCGAGCTACGCACTCTTGAC 197 Query 41183 GTATATGATTGCACACGTTAC 41203 | |||| || || ||||| Sbjct 196 GCGGCTGATCGCGCAGGTTAC 176 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397372310298385