Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950795.1_202016-12-27] 17,277 sequences; 65,230,783 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq5268 206 2e-48 seq757 205 8e-48 seq1466 86.0 5e-12 >seq5268 Length=2107 Score = 206 bits (228), Expect = 2e-48 Identities = 437/644 (68%), Gaps = 16/644 (2%) Strand=Plus/Plus Query 29824 GTTTATCCTCAGTGT-GGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTT 29882 ||| |||| ||| || ||||| | | |||| | | | | |||||| ||| || |||| Sbjct 52 GTTGATCCGCAGCGTTGGGAACGCGCGTGGGGTGCGCC-CTAGCTGAACCTTGAGGGGTT 110 Query 29883 CCACGTTATCCAGGTAGACGTGAGCGTCTCCCAGGTTGTGGACAAACTCTCCCGGTTCTA 29942 | || | ||||| || | ||||||||| || | | |||| | || || |||| | Sbjct 111 CGACATGGTCCAGATAAATGTGAGCGTCGCCAATGGTGTGAATGAAGTCACCCGCCCGGA 170 Query 29943 GCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTA 30002 | || || || || || |||| ||| | ||| | |||||| |||||||| ||||| | Sbjct 171 GTCCTGTAACCTGCGCGATCAGCCGCGTCAAGAGTGCGTAGCTCGCGATGTTGAAGGGCA 230 Query 30003 CCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTCA 30062 | |||||||||||||| | || | ||| || | || ||||| ||||| ||||| | Sbjct 231 CGCCGAGCCCCATGTCGGCTGAGCGCTGATACATTTGGCACGATAGCTCACCGTCCGCGA 290 Query 30063 CGTAAAACTGACACATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAG-TCTTTGGGG 30121 |||||||||| || | |||||| || || || ||||| | ||| || ||| Sbjct 291 CGTAAAACTGGCAGAACATGTGGCAGGGGGGCAGTGCCAT-CTCCTTAAGATCGGCCGGG 349 Query 30122 TTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTC-----CTGATGAGGTCCA 30176 ||||| || ||| ||| ||||| | ||| | || || || || |||| || Sbjct 350 TTCCATGCTGACATGATTATGCGACGGTCGTTCGGATTCGTCTTCAGCTTATGA--ATCA 407 Query 30177 CGGCGTTTTGC-AGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTAC 30235 | | ||| ||||| || || ||| || | |||||| || ||| ||||||| Sbjct 408 C----CTCTGCAAGCTGGTCGACGCCCTGGCCGGTGTAGTCGGCGTGCATCGTCGTGTAC 463 Query 30236 TCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTG 30295 | ||| ||||| || | ||||||||| |||||||||||||| |||||||| |||| | Sbjct 464 TTTGCGCCGAAGTGGCGCCACTGGAAACCGTACACCGGTCCGAGGTCTCCGGCTTCACGA 523 Query 30296 TGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACC 30355 || ||| || | | || | | | || | || || ||| | |||||||| || | Sbjct 524 TGACCGAGACCAATGCTTTCGAGATATTCCTTTGACCCATTGCCATCCCAGATTTTGATG 583 Query 30356 CCCTTCTCAGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCC 30415 ||||| || || |||| ||| ||| || |||| |||||||| ||||||||| Sbjct 584 CCCTTGTCCTGCAGGGTCTTGGCGTTGGTGTCACCACTGATGAACCACAACAGCTCCTCT 643 Query 30416 ACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAAA 30459 | ||| | ||| || || | |||||||| || || ||||| Sbjct 644 GCAACGCCGCGCCAGAACACGCGTTTGGTCGTTAGAAGTGGAAA 687 >seq757 Length=19743 Score = 205 bits (226), Expect = 8e-48 Identities = 433/641 (68%), Gaps = 10/641 (2%) Strand=Plus/Minus Query 29824 GTTTATCCTCAGTGT-GGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTT 29882 ||| |||| ||| || ||||| | | |||| | | | | ||||| ||| || || | Sbjct 19494 GTTGATCCGCAGCGTTGGGAACGCGCGTGGGGTGCGCC-CTAGCTGGACCTTGAGGGGCT 19436 Query 29883 CCACGTTATCCAGGTAGACGTGAGCGTCTCCCAGGTTGTGGACAAACTCTCCCGGTTCTA 29942 | || | ||||||||| | ||||||||| || | | |||| | || || |||| | Sbjct 19435 CGACATGATCCAGGTAAATGTGAGCGTCGCCAATGGTGTGAATGAAGTCACCCGCCCGCA 19376 Query 29943 GCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTA 30002 |||| || || || || |||| ||| | ||| | |||||| |||||||| ||||| | Sbjct 19375 GCCCTGTAACCTGCGCGATCAGCCGCGTCAAGAGCGCGTAGCTCGCGATGTTGAAGGGCA 19316 Query 30003 CCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTCA 30062 | ||||| |||||||| | || | ||| || | ||| || || ||||| ||||| | Sbjct 19315 CACCGAGACCCATGTCGGCTGAGCGCTGATACATCTGGCAAGACAGCTCACCGTCCGCGA 19256 Query 30063 CGTAAAACTGACACATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGT 30122 |||||||||| || | ||| || || || || ||||| | || |||| Sbjct 19255 CGTAAAACTGGCAGAACATGTGACAGGGGGGCAGTGCCATCTCCTTGAGATCGGCCGGGT 19196 Query 30123 TCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGA---TGAGGTCCACGG 30179 |||| || ||| ||| ||||| | ||| | || || || | | |||| ||| Sbjct 19195 TCCATGCTGACATGATTATGCGACGGTCGTTCGGATTCGTCTTCAGTTTGAGAATCACCT 19136 Query 30180 CGTTTTGC-AGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCT 30238 || || ||||| || || ||| |||| |||||| || ||| |||||||| | Sbjct 19135 CG----GCAAGCTGGTCGACGCCCTGACCCGTGTAGTCGGCGTGCATCGTCGTGTACTTT 19080 Query 30239 GCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGC 30298 || ||||| || | ||||||||| |||||||||||||| |||||||| |||| | || Sbjct 19079 GCGCCGAAGTGGCGCCACTGGAAGCCGTACACCGGTCCGAGGTCTCCGGCTTCACGATGA 19020 Query 30299 TCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCC 30358 ||| || | | || | | | || | || || ||| | |||||||| || | ||| Sbjct 19019 CCGAGACCAATGCTTTCGAGATATTCCTTTGACCCATTGCCATCCCAGATTTTGATGCCC 18960 Query 30359 TTCTCAGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACG 30418 || || ||| |||| ||| ||| || |||| |||||||| ||| ||||| | Sbjct 18959 TTGTCCTGCAGCGTCTTGGCGTTGGTGTCACCACTGATGAACCACAACAGTTCCTCTGCA 18900 Query 30419 ACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAAA 30459 || | ||| || || | |||||||| || || ||||| Sbjct 18899 ACACCGCGCCAGAACACGCGTTTGGTCGTAAGAAGTGGAAA 18859 >seq1466 Length=11765 Score = 86.0 bits (94), Expect = 5e-12 Identities = 106/137 (77%), Gaps = 6/137 (4%) Strand=Plus/Plus Query 52761 CCAGAGATGGGCGACAAGTTT-GC-GTCGTTCACGGCGCAAAAGGGGACGTGCGGAGCCG 52818 || ||||| ||||||||||| || |||| |||||| || ||||| |||||| || Sbjct 1095 CCCGAGATCGGCGACAAGTTCAGCAGTCGC-CACGGC-CAGAAGGGCGTGTGCGGCACCA 1152 Query 52819 TCCTGACCCAGGAGGACATGCCCTTCGACAAGGACGGGGTGGTGCCC-GACCTCATCATC 52877 ||| | ||||||||||||||| ||| || | | || || |||||| ||||||||||| Sbjct 1153 TCCGCAACCAGGAGGACATGCCGTTCAACGACCAGGGCGT-GTGCCCGGACCTCATCATG 1211 Query 52878 AACCCCCACGCCTTTCC 52894 ||||| |||| ||| || Sbjct 1212 AACCCGCACGGCTTCCC 1228 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406224845885484