Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950795.1_202016-12-27] 17,277 sequences; 65,230,783 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq7289 96.9 3e-15 seq7513 91.5 1e-13 >seq7289 Length=1152 Score = 96.9 bits (106), Expect = 3e-15 Identities = 107/143 (75%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||||||||||||||| | || || || || || || || || Sbjct 1010 ATGCAGATCTTCGTCAAGACTCTGACCGGCAAGACGATCACGCTCGACGTCGAGCCTTCG 1069 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| ||||| | ||||| || || || || ||||| || ||||| || || ||||| Sbjct 1070 GACAGCATTGACAATGTCAAGCAGAAGATCCAGGACAAGGAGGGCATCCCTCCGGATCAG 1129 Query 27108 CAGCGTTTAATATACGCCGGCAA 27130 ||||| | || | ||||||||| Sbjct 1130 CAGCGCCTGATCTTCGCCGGCAA 1152 >seq7513 Length=1086 Score = 91.5 bits (100), Expect = 1e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||||||||||||||| | || || || || || || || || Sbjct 143 ATGCAGATCTTCGTCAAGACTCTGACCGGCAAGACGATCACGCTCGACGTCGAGCCTTCG 84 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || ||||| | ||||| || || || || ||||| || ||||| || || ||||| Sbjct 83 GATAGCATTGACAATGTCAAGCAGAAGATCCAGGACAAGGAGGGCATCCCTCCGGATCAG 24 Query 27108 CAGCGTTTAATATACGCCGGCAA 27130 ||||| | || | ||||||||| Sbjct 23 CAGCGCCTGATCTTCGCCGGCAA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434824473935040