Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950795.1_202016-12-27] 17,277 sequences; 65,230,783 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq5268 205 7e-48 seq757 201 8e-47 >seq5268 Length=2107 Score = 205 bits (226), Expect = 7e-48 Identities = 440/646 (68%), Gaps = 20/646 (3%) Strand=Plus/Plus Query 27090 GTTTATCCTCAGTGT-GGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTT 27148 ||| |||| ||| || ||||| | | |||| | | | | |||||| ||| || |||| Sbjct 52 GTTGATCCGCAGCGTTGGGAACGCGCGTGGGGTGCGCC-CTAGCTGAACCTTGAGGGGTT 110 Query 27149 CCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTA 27208 | || || ||||| || | ||||||||| || | |||||| | || || |||| | Sbjct 111 CGACATGGTCCAGATAAATGTGAGCGTCGCCAATGGTGTGAATGAAGTCACCCGCCCGGA 170 Query 27209 GCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTA 27268 | || || || || || |||| ||| | ||| | |||||| |||||||| ||||| | Sbjct 171 GTCCTGTAACCTGCGCGATCAGCCGCGTCAAGAGTGCGTAGCTCGCGATGTTGAAGGGCA 230 Query 27269 CCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTTA 27328 | |||||||||||||| | || | ||| || | || ||||| ||||| || || | Sbjct 231 CGCCGAGCCCCATGTCGGCTGAGCGCTGATACATTTGGCACGATAGCTCACCGTCCGCGA 290 Query 27329 CGTAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAG-TCTTTGGGG 27387 |||||||||| || | |||||| || || || ||||| | ||| || ||| Sbjct 291 CGTAAAACTGGCAGAACATGTGGCAGGGGGGCAGTGCCAT-CTCCTTAAGATCGGCCGGG 349 Query 27388 TTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTC-----CTGATGAGGTCCA 27442 ||||| || ||| ||| ||||| | ||| | || || || || |||| || Sbjct 350 TTCCATGCTGACATGATTATGCGACGGTCGTTCGGATTCGTCTTCAGCTTATGA--ATCA 407 Query 27443 CGGCGTTTTGC-AGCTGATCCACCCCCATCCCCGAGTAGTCTACCCTCATGTCCGTGTAC 27501 | | ||| ||||| || || ||| || | |||||| | ||| ||||||| Sbjct 408 C----CTCTGCAAGCTGGTCGACGCCCTGGCCGGTGTAGTCGGCGTGCATCGTCGTGTAC 463 Query 27502 TCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTG 27561 | ||| ||||| || | ||| ||||| |||||||||||||| |||||||| |||| | Sbjct 464 TTTGCGCCGAAGTGGCGCCACTGGAAACCGTACACCGGTCCGAGGTCTCCGGCTTCACGA 523 Query 27562 TGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACC 27621 || ||| || | | || | | | || | || || ||| | |||||||| || | Sbjct 524 TGACCGAGACCAATGCTTTCGAGATATTCCTTTGACCCATTGCCATCCCAGATTTTGATG 583 Query 27622 CCCTTCTC--GGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCT 27679 ||||| || | || | || |||| ||| ||| || |||| |||||||| |||||||| Sbjct 584 CCCTTGTCCTGCAG-GGTC-TTGGCGTTGGTGTCACCACTGATGAACCACAACAGCTCCT 641 Query 27680 CCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAAA 27725 | | ||| | ||| || || | |||||||| || || ||||| Sbjct 642 CTGCAACGCCGCGCCAGAACACGCGTTTGGTCGTTAGAAGTGGAAA 687 >seq757 Length=19743 Score = 201 bits (222), Expect = 8e-47 Identities = 432/641 (67%), Gaps = 10/641 (2%) Strand=Plus/Minus Query 27090 GTTTATCCTCAGTGT-GGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTT 27148 ||| |||| ||| || ||||| | | |||| | | | | ||||| ||| || || | Sbjct 19494 GTTGATCCGCAGCGTTGGGAACGCGCGTGGGGTGCGCC-CTAGCTGGACCTTGAGGGGCT 19436 Query 27149 CCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTA 27208 | || ||||||||||| | ||||||||| || | |||||| | || || |||| | Sbjct 19435 CGACATGATCCAGGTAAATGTGAGCGTCGCCAATGGTGTGAATGAAGTCACCCGCCCGCA 19376 Query 27209 GCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTA 27268 |||| || || || || |||| ||| | ||| | |||||| |||||||| ||||| | Sbjct 19375 GCCCTGTAACCTGCGCGATCAGCCGCGTCAAGAGCGCGTAGCTCGCGATGTTGAAGGGCA 19316 Query 27269 CCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTTA 27328 | ||||| |||||||| | || | ||| || | ||| || || ||||| || || | Sbjct 19315 CACCGAGACCCATGTCGGCTGAGCGCTGATACATCTGGCAAGACAGCTCACCGTCCGCGA 19256 Query 27329 CGTAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGT 27388 |||||||||| || | ||| || || || || ||||| | || |||| Sbjct 19255 CGTAAAACTGGCAGAACATGTGACAGGGGGGCAGTGCCATCTCCTTGAGATCGGCCGGGT 19196 Query 27389 TCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGA---TGAGGTCCACGG 27445 |||| || ||| ||| ||||| | ||| | || || || | | |||| ||| Sbjct 19195 TCCATGCTGACATGATTATGCGACGGTCGTTCGGATTCGTCTTCAGTTTGAGAATCACCT 19136 Query 27446 CGTTTTGC-AGCTGATCCACCCCCATCCCCGAGTAGTCTACCCTCATGTCCGTGTACTCT 27504 || || ||||| || || ||| |||| |||||| | ||| |||||||| | Sbjct 19135 CG----GCAAGCTGGTCGACGCCCTGACCCGTGTAGTCGGCGTGCATCGTCGTGTACTTT 19080 Query 27505 GCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGC 27564 || ||||| || | ||| ||||| |||||||||||||| |||||||| |||| | || Sbjct 19079 GCGCCGAAGTGGCGCCACTGGAAGCCGTACACCGGTCCGAGGTCTCCGGCTTCACGATGA 19020 Query 27565 TCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCC 27624 ||| || | | || | | | || | || || ||| | |||||||| || | ||| Sbjct 19019 CCGAGACCAATGCTTTCGAGATATTCCTTTGACCCATTGCCATCCCAGATTTTGATGCCC 18960 Query 27625 TTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACG 27684 || || ||| |||| ||| ||| || |||| |||||||| ||| ||||| | Sbjct 18959 TTGTCCTGCAGCGTCTTGGCGTTGGTGTCACCACTGATGAACCACAACAGTTCCTCTGCA 18900 Query 27685 ACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAAA 27725 || | ||| || || | |||||||| || || ||||| Sbjct 18899 ACACCGCGCCAGAACACGCGTTTGGTCGTAAGAAGTGGAAA 18859 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369429395293787