Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950795.1_202016-12-27] 17,277 sequences; 65,230,783 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq7289 109 1e-18 seq7513 105 2e-17 seq683 86.0 1e-11 >seq7289 Length=1152 Score = 109 bits (120), Expect = 1e-18 Identities = 115/150 (77%), Gaps = 1/150 (1%) Strand=Plus/Minus Query 151962 TTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTT 152021 || ||||||||||| || | |||||| |||| | ||| || ||||| || || || || Sbjct 1152 TTGCCGGCGAAGATCAGGCGCTGCTGATCCGGAGGGATGCCCTCCTTGTCCTGGATCTTC 1093 Query 152022 TGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTG 152081 || |||||| | || | |||||| ||| ||| || || || || || || ||||| || Sbjct 1092 TGCTTGACATTGTCAATGCTGTCCGAAGGCTCGACGTCGAGCGTGATCGTCTTGCCGGTC 1033 Query 152082 AGAGTCTTCACGAAGACCTGCAT-TTTACC 152110 |||||||| ||||||| |||||| |||||| Sbjct 1032 AGAGTCTTGACGAAGATCTGCATCTTTACC 1003 >seq7513 Length=1086 Score = 105 bits (116), Expect = 2e-17 Identities = 114/150 (76%), Gaps = 1/150 (1%) Strand=Plus/Plus Query 151962 TTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTT 152021 || ||||||||||| || | |||||| |||| | ||| || ||||| || || || || Sbjct 1 TTGCCGGCGAAGATCAGGCGCTGCTGATCCGGAGGGATGCCCTCCTTGTCCTGGATCTTC 60 Query 152022 TGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTG 152081 || |||||| | || | ||| || ||| ||| || || || || || || ||||| || Sbjct 61 TGCTTGACATTGTCAATGCTATCCGAAGGCTCGACGTCGAGCGTGATCGTCTTGCCGGTC 120 Query 152082 AGAGTCTTCACGAAGACCTGCAT-TTTACC 152110 |||||||| ||||||| |||||| |||||| Sbjct 121 AGAGTCTTGACGAAGATCTGCATCTTTACC 150 >seq683 Length=21216 Score = 86.0 bits (94), Expect = 1e-11 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 115629 TTCTATGCCATTTGGACATCTGATCTTTTTATGAAGCGAGTCAAGGCAAACGGAATGTGG 115688 ||||| ||||| |||| | ||||| || |||||||||||| |||| ||||| |||| Sbjct 19826 TTCTACGCCATGTGGATCCCGGATCTCTTCATGAAGCGAGTCGAGGCCAACGGCGAGTGG 19767 Query 115689 AGCCTCTTTTGTCCCAATGAAGCCCCTGGTCT 115720 |||||||| || |||||||| || || ||||| Sbjct 19766 AGCCTCTTCTGCCCCAATGAGGCACCGGGTCT 19735 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153565388424867