Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950815.1_202016-12-27] 15,153 sequences; 47,142,494 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq2941 149 4e-31 seq200 136 3e-27 >seq2941 Length=3149 Score = 149 bits (164), Expect = 4e-31 Identities = 172/229 (75%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || || | |||||||||||| | || || ||||| ||||||||||| ||| Sbjct 3067 CCACCACGGAGACGCAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAC 3008 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC-GACGGG 34281 ||| ||| |||| || | ||||||||| || || || || ||||||||||| | |||| Sbjct 3007 AGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGCGGG 2948 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341 | || ||||||||| ||||| ||||| | | | | ||||| || | || || || Sbjct 2947 -ATGCCCTCCTTGTCCTGAATCTTCTGCTTCACGTTGTCGATCGAGTCCGACGGCTCCAC 2889 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 ||||| |||||| || ||||| || || || ||||| |||||||||||| Sbjct 2888 GTCCAGCGTGATCGTCTTGCCCGTCAGCGTCTTCACGAAGATCTGCATC 2840 >seq200 Length=35225 Score = 136 bits (150), Expect = 3e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | ||||||||||| | || || ||||| ||||||||||| || Sbjct 30879 CCACCACGCAGGCGGAGCACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAG 30938 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 ||| ||| |||| || | ||||||||| ||||| || || |||||||| || || Sbjct 30939 AGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGATCCGGAGGG 30998 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| ||||| ||||| | || | | || ||| | | |||||| Sbjct 30999 ATGCCCTCCTTGTCCTGGATCTTCTGCTTGACATTGTCAATGCTATCCGAAGGCTCGACG 31058 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || | |||||| || |||||||| ||||| || || |||||||||||| Sbjct 31059 TCGAGCGTGATCGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCATC 31106 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323012335971680