Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950815.1_202016-12-27] 15,153 sequences; 47,142,494 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq152 152 3e-32 seq882 82.4 5e-11 >seq152 Length=41146 Score = 152 bits (168), Expect = 3e-32 Identities = 395/597 (66%), Gaps = 15/597 (3%) Strand=Plus/Plus Query 25373 GTTTATCCTCAGTGT-GGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTT 25431 ||| |||| ||| || ||||| | | |||| | | | | ||||| ||| || || | Sbjct 26656 GTTGATCCGCAGCGTTGGGAACGCGCGTGGGGTGCGCC-CTAGCTGGACCTTGAGGGGCT 26714 Query 25432 CTACGTGATCCAGGTAGACGTGAGCGTCTCCCAGAGTGTGGACAAACTCTCCCGGTTCTA 25491 | || ||||||||||| | ||||||||| || | ||||| | || || |||| | Sbjct 26715 CGACATGATCCAGGTAAATGTGAGCGTCCCCAATGGTGTGAATGAAGTCACCCGCCCGCA 26774 Query 25492 GCCCGGTAACGTAAGCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGTA 25551 | || ||||| | || |||| ||| | ||| |||||| |||||||| ||||| | Sbjct 26775 GTCCTGTAACCTGCGCGATCAGCCGCGTCAAGAGTGCGTAGCTCGCGATGTTGAAGGGCA 26834 Query 25552 CCCCGAACCCCATGTCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTCGCTC 25611 | |||| ||||||| | | || | ||| || | ||| || || ||||| |||| Sbjct 26835 CACCGAGACCCATGT-CAGCTGAGCGCTGATACATCTGGCAAGACAGCTCACCGTCCGCG 26893 Query 25612 ACGTAAAACTGACACATGGTGTAGCACGGAGGAAGAGCTATAAGGCCCAAGTCTTTAGGG 25671 ||||||||||| || | ||| ||| || || || || || | || ||| Sbjct 26894 ACGTAAAACTGGCAGAACATGTGGCAGGGGGGCAGTGCCATTTCCTTGAGATCGGCCGGG 26953 Query 25672 TTCCAGGCGCACACGATGATGCACCTGTC-TTCTGGGTTGTC-----CCTGATAAGATCC 25725 ||||| || ||| ||| |||| | ||| ||| | ||||| ||| || || Sbjct 26954 TTCCATGCTGACATGATTATGCGACGGTCGTTCGGATTTGTCTTCAGTTTGAGAATCACC 27013 Query 25726 GCGGTGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTAC 25785 ||| ||||| || || ||| || | |||||| || ||| ||||||| Sbjct 27014 TCGG------CAAGCTGGTCGACGCCCTGACCAGTGTAGTCGGCGTGCATCGTCGTGTAC 27067 Query 25786 TCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTCTCCATCTTCCCTG 25845 | ||| ||||| | | ||||||||| |||||||||||||| |||||||| |||| | Sbjct 27068 TTTGCGCCGAAGTGGCGCCACTGGAAGCCGTACACCGGTCCGAGGTCTCCGGCTTCACGA 27127 Query 25846 TGCTCAAAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTCCCAGATCTTTACC 25905 || | | || | | || | | | || | || |||||| | |||||||| || | Sbjct 27128 TGACCGAGACCAATGCTTTCGAGATATTCCTTTGACCCATTGCCATCCCAGATTTTGATG 27187 Query 25906 CCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCC 25962 ||||| || ||| |||| ||| ||| || |||| |||||||| ||| ||| Sbjct 27188 CCCTTGTCCTGTAGCGTCTTGGCGTTGGTGTCACCACTGATGAACCACAACAGTTCC 27244 >seq882 Length=11095 Score = 82.4 bits (90), Expect = 5e-11 Identities = 105/137 (77%), Gaps = 6/137 (4%) Strand=Plus/Plus Query 44399 CCAGAGATGGGCGACAAGTTT-GC-GTCGTTCACGGCGCAAAAGGGGACATGCGGAGCCG 44456 || ||||| ||||||||||| || |||| |||||| || ||||| ||||| || Sbjct 1841 CCCGAGATCGGCGACAAGTTCAGCAGTCGC-CACGGC-CAGAAGGGCGTGTGCGGCACCA 1898 Query 44457 TCCTGACCCAGGAGGACATGCCCTTCGACAAAAACGGGGTGGTGCCC-GACCTCATCATC 44515 ||| | ||||||||||||||| ||| || | | || || |||||| ||||||||||| Sbjct 1899 TCCGCAACCAGGAGGACATGCCGTTCAACGACCAGGGCGT-GTGCCCGGACCTCATCATG 1957 Query 44516 AACCCCCACGCCTTTCC 44532 ||||| |||| ||| || Sbjct 1958 AACCCGCACGGCTTCCC 1974 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340074784344669