Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950815.1_202016-12-27] 15,153 sequences; 47,142,494 total letters Query= NC_008187.1 Length=191100 Score E Sequences producing significant alignments: (Bits) Value seq882 95.1 1e-14 seq711 87.8 2e-12 >seq882 Length=11095 Score = 95.1 bits (104), Expect = 1e-14 Identities = 192/285 (67%), Gaps = 0/285 (0%) Strand=Plus/Plus Query 15365 TCGGGCTTTACCGGCGAAAGGATCCAAAGCACCATATTTATGGGACCGACGTACTATCAC 15424 |||||| | || ||||| |||| || ||| || ||||| |||| ||||| || Sbjct 2156 TCGGGCATCACGGGCGAGCCCATCCTGTGCTACATCTTCATGGGCCCGATCTACTACCAG 2215 Query 15425 CGACTCAAACACATGGTAAAGGACAAGATGCACGCGCGATCGCACGGACAGGTGACGACG 15484 |||||| |||||||| | |||||||||||||||||| ||| ||| | | || | Sbjct 2216 AAACTCAAGCACATGGTCATGGACAAGATGCACGCGCGTGCGCGCGGCCCCCGGGCGGTG 2275 Query 15485 CTCCATCGCCAGCCCAACTGCGGTCGATCGCAAGGCGGTGGCCTCCGCTTTGGAGAGATG 15544 ||| || ||||| | | || || |||| | ||| ||||| || | || |||||| Sbjct 2276 CTCACGCGGCAGCCGACCGAGGGCCGCTCGCGCGACGGCGGCCTGCGTCTCGGCGAGATG 2335 Query 15545 GAAAAGGACTGCATTCTGGTGCACGGCGCCACCCAATTCCTCAACGAGCGCATGTTTCTC 15604 || |||||| | | | ||||||| | | | |||| |||||| || | || Sbjct 2336 GAGCGCGACTGCCTCATCGGCTACGGCGCGAGCATGCTGCTCATGGAGCGCCTGATGATC 2395 Query 15605 AACAGTGACCCGTTCCAGATTGACGTGTGCAAAGACTGCGGCATG 15649 |||||| ||||| | ||||||||| | | ||| ||||| Sbjct 2396 TCGAGTGACGCGTTCTCGGCGGACGTGTGCCAGGGCTGTCGCATG 2440 Score = 86.0 bits (94), Expect = 8e-12 Identities = 128/179 (72%), Gaps = 2/179 (1%) Strand=Plus/Plus Query 15018 TCGTAAAGGTTGTCATTGGCCAGATGCGCACGCCCGAGATTGGCGACAAGTTTTGCTCT- 15076 |||| ||||| |||| |||||| |||| ||||||||| ||||||||||| || | Sbjct 1809 TCGTCAAGGTGCTCATCCGCCAGACGCGCCGGCCCGAGATCGGCGACAAGTTCAGCAGTC 1868 Query 15077 GGTATGGCGCAAAAGGGCACGTGCGGCATGATTTTCCCCCAGGAAGACATGCCCTTTACC 15136 | | ||| || |||||| |||||||| || | |||||| |||||||| || | | Sbjct 1869 GCCACGGC-CAGAAGGGCGTGTGCGGCACCATCCGCAACCAGGAGGACATGCCGTTCAAC 1927 Query 15137 GCGTCAGGCATGACGCCCGACATTATCATCAACCCCAACTGCATCCCGTCCCGCATGAC 15195 | ||| || || ||| | ||||| ||||| || || ||||| ||||||||| Sbjct 1928 GACCAGGGCGTGTGCCCGGACCTCATCATGAACCCGCACGGCTTCCCGAGCCGCATGAC 1986 >seq711 Length=13416 Score = 87.8 bits (96), Expect = 2e-12 Identities = 148/213 (69%), Gaps = 1/213 (0%) Strand=Plus/Minus Query 126169 TTGTGCG-GTTTGGTGTAAATGTAGCGGGGAGCTGCCGAATCCTTGCCTCCCTCCAACCG 126227 |||| || | ||||| ||||||| || |||| ||| | ||| || || || |||||| Sbjct 1035 TTGTTCGAGGTTGGTAAAAATGTAACGAGGAGATGCGGCATCTTTACCACCGGACAACCG 976 Query 126228 CGTGCCAAACTGACCGTCCGGCTCCAACAACTGCACATTGTTGGCTCCCACAAAGTCCTG 126287 || || ||||| |||| || ||| | || | |||||| |||||| || || || Sbjct 975 TGTACCGAACTGGCCGTTTGGAGACAAGAGATGAATGTTGTTGCTTCCCACGAAATCTTG 916 Query 126288 CGCAAACTTGACAATGGTCTCGCACAGGTTCTGCTCGCCGTGCTTGTAGTCGGTCTGCTC 126347 || | |||| ||||| || ||| |||| ||||| || | || | | ||||| Sbjct 915 TGCCATGTTGATGATGGTGCCGTTCAGACTCTGTTCGCCATGATGATACGCTGAGTGCTC 856 Query 126348 GGCCACGTAGCCGCTCAGCTGCGCAACCTTGAT 126380 | ||||||||| ||||| ||||||||||| Sbjct 855 CGACACGTAGCCTGCGAGCTGTGCAACCTTGAT 823 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611276194712800