Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950815.1_202016-12-27] 15,153 sequences; 47,142,494 total letters Query= NC_009447.1 Length=52414 Score E Sequences producing significant alignments: (Bits) Value seq398 84.2 7e-12 >seq398 Length=21318 Score = 84.2 bits (92), Expect = 7e-12 Identities = 181/267 (68%), Gaps = 8/267 (3%) Strand=Plus/Plus Query 29331 ACGCCGCGTGACTCCATGCACATGTGGCGAGCATTGATCGTGACGTAAACCGCGCGCGGC 29390 |||||||| | ||||||||||||| || | ||| |||| || | ||||| Sbjct 14981 ACGCCGCGCATCACCATGCACATGTGCGTCGCTTCGATAACGACGGCCACGCCTTGCGGC 15040 Query 29391 TGAACGTGTTGGGCCAG--CGCATCCGCGATCTGGTTCGTCAGGCGCTCTTGAACTTGCA 29448 |||| || | | | ||| | ||||||||| || |||| |||||||| || |||| Sbjct 15041 TGAA--TGACGCCCATGATCGCGTTCGCGATCTGCTTGGTCAATCGCTCTTGCACCTGCA 15098 Query 29449 GGCGCTTGGCGAAAATGTCTGCCAGCCGCTTGAGCTTCGAAATACCGACGACTTTGCCGC 29508 | ||| || || | || | | || ||| || | ||||| || |||||| Sbjct 15099 GCCGCCGGGAAAAGACCTCAGAGATACGAGCGAGTTTGCTGAGACCGAGCACCTTGCCGT 15158 Query 29509 TCGGGATATAGCCGATATGGGCCGTTCCCATGATCGCCGCCATATGGTGTTCGCAGTGCG 29568 |||||||||||||||| || || | || |||| || | |||| || || || ||| ||| Sbjct 15159 TCGGGATATAGCCGATGTGCACCTTGCCGATGAACGGCACCATGTGATGCTCACAGAGCG 15218 Query 29569 A--ATAGATCGGGATATCGCGAACGAT 29593 | | ||||| || ||||| ||||| Sbjct 15219 AGTACAGATC--AATGTCGCGGACGAT 15243 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 167573041165936