Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950815.1_202016-12-27] 15,153 sequences; 47,142,494 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq96 114 1e-20 seq420 104 2e-17 seq53 84.2 2e-11 >seq96 Length=50776 Score = 114 bits (126), Expect = 1e-20 Identities = 165/233 (71%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 108355 ACGGCCGGCGTCCATCGGATGTGGACCCACAAAGCCTACAAGGCCACCGCCCCGTTCAGG 108414 |||||||||| ||| || ||||| | ||| |||||| |||| |||| | | Sbjct 17524 ACGGCCGGCGCCCACCGTCTGTGGTCGCACCGCAGCTACAACGCCAAGTTCCCGCTTCGT 17465 Query 108415 GTGTTCCTGGCGCTTTGCTTCTCGGTGGCAGGACAGAACACCATCCCGCAGTGGGTGCTC 108474 |||||||| ||| ||| |||| |||| ||| || |||| ||||| || | Sbjct 17464 GTGTTCCTCATGCTCTGCAACTCGATGGCCTTCCAGGGCAGCATCTTCGAGTGGTCGCGC 17405 Query 108475 GATCACAGGGTTCACCACAAGTACTCTGACACGACGGCCGACCCACACAACGCCAACAGG 108534 || ||| | | |||||||||| ||| |||||||||||||| || || ||||||| | Sbjct 17404 GACCACCGCGCTCACCACAAGGGCTCGGACACGACGGCCGATCCCCATAACGCCACGCGC 17345 Query 108535 GGGTTCTGGTTCTCGCACGTGGGATGGCTCATGATGACCAAGGACCCCGACGT 108587 || |||| ||| ||||| |||| ||| ||||| | |||| ||||| |||| Sbjct 17344 GGCTTCTTCTTCGCGCACATGGGCTGGGTCATGGTTCGCAAGCACCCCAACGT 17292 >seq420 Length=20579 Score = 104 bits (114), Expect = 2e-17 Identities = 177/254 (70%), Gaps = 2/254 (1%) Strand=Plus/Minus Query 108347 TCGGTGTGACGGCCGGCGTCCATCGGATGTGGACCCACAAAGCCTACAAGGC-CACCGCC 108405 |||| | |||||||||| |||||| ||||| | ||| ||||||||| ||| || Sbjct 8894 TCGGCATCACGGCCGGCGCGCATCGGCTGTGGGCGCACCGCAGCTACAAGGCGCACGGCA 8835 Query 108406 CCGTTCAGGGTGTTCCTGGCGCTTTGCTTCTCGGTGGCAGGACAGAACACCATCCCGCAG 108465 ||| | | | ||||| ||| ||| |||| |||| ||| ||| ||| || Sbjct 8834 TCGTGC-GCTTCTTCCTCATGCTCTGCAACTCGATGGCGAACCAGGGCACGATCTTCCAC 8776 Query 108466 TGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACACGACGGCCGACCCACACAAC 108525 ||| | ||| ||| | || |||||||||||||| |||||| |||| ||||| ||| || Sbjct 8775 TGGTGTCGCGACCACCGCGTGCACCACAAGTACTCGGACACGTCGGCGGACCCGCACGAC 8716 Query 108526 GCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATGATGACCAAGGACCCCGAC 108585 | | | || |||| ||| ||||| |||| ||||| | ||| |||||||| | Sbjct 8715 TCGGGCCGCGGCTTCTTCTTCGCGCACATGGGCTGGCTGCTCGTGAAGAAGGACCCGCGC 8656 Query 108586 GTGATCTCGGCCGG 108599 ||||| |||||| Sbjct 8655 GTGATTGAGGCCGG 8642 >seq53 Length=63490 Score = 84.2 bits (92), Expect = 2e-11 Identities = 93/124 (75%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 108464 AGTGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACACGACGGCCGACCCACACA 108523 ||||| || ||| ||| | | ||||||||| ||| |||||||||||||| || || | Sbjct 46275 AGTGGTCGCGCGACCACCGCGCGCACCACAAGGGCTCGGACACGACGGCCGATCCGCATA 46334 Query 108524 ACGCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATGATGACCAAGGACCCCG 108583 |||||| | || |||| ||| ||||| |||| ||| ||||| | |||| ||||| Sbjct 46335 ACGCCACGCGCGGCTTCTTCTTCGCGCACATGGGCTGGGTCATGGTTCGCAAGCACCCCA 46394 Query 108584 ACGT 108587 |||| Sbjct 46395 ACGT 46398 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381702295273032