Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950815.1_202016-12-27]
15,153 sequences; 47,142,494 total letters
Query= NC_023177.1
Length=124688
Score E
Sequences producing significant alignments: (Bits) Value
seq2941 84.2 2e-11
seq200 84.2 2e-11
>seq2941
Length=3149
Score = 84.2 bits (92), Expect = 2e-11
Identities = 106/146 (73%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 107623 TCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAGCAGAGAC 107682
||| | | || || || |||||| || || || ||| | || ||| |||||| | |
Sbjct 2908 TCGACAACGTGAAGCAGAAGATTCAGGACAAGGAGGGCATCCCGCCGGACCAGCAGCGCC 2967
Query 107683 TTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAACATTCAAA 107742
| || | ||| || || ||||| ||||||| | || || ||||||||||||| || |
Sbjct 2968 TGATCTTTGCCGGCAAGCAGCTCGAGGACGGCCGCACGCTGTCGGACTACAACATCCAGA 3027
Query 107743 AGGAGTCTACGTTGCACATGGTGTTG 107768
||||||| ||| ||||| ||||| ||
Sbjct 3028 AGGAGTCGACGCTGCACCTGGTGCTG 3053
>seq200
Length=35225
Score = 84.2 bits (92), Expect = 2e-11
Identities = 153/223 (69%), Gaps = 1/223 (0%)
Strand=Plus/Minus
Query 107543 TAAGAGGTTTAAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGA 107602
||| |||| || ||||| || || ||||| ||| | || ||||| || || || ||||
Sbjct 31117 TAACAGGTA-AAGATGCAGATCTTCGTCAAGACTCTGACCGGCAAGACGATCACGCTCGA 31059
Query 107603 AACGGAGGCTGGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGT 107662
||| || |||| | | | | || || || ||||| || || || ||| |
Sbjct 31058 CGTCGAGCCTTCGGATAGCATTGACAATGTCAAGCAGAAGATCCAGGACAAGGAGGGCAT 30999
Query 107663 GCCCGTGGATCAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAAT 107722
|| |||||||||| | || || | || || || ||||| ||||||| | || |
Sbjct 30998 CCCTCCGGATCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACGCT 30939
Query 107723 GGCGGACTACAACATTCAAAAGGAGTCTACGTTGCACATGGTG 107765
||||||||||||| || |||||||| ||| | ||| |||||
Sbjct 30938 CTCGGACTACAACATCCAGAAGGAGTCGACGCTCCACCTGGTG 30896
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 398803136554417
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |