Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950815.1_202016-12-27] 15,153 sequences; 47,142,494 total letters Query= NC_023848.1 Length=163023 Score E Sequences producing significant alignments: (Bits) Value seq882 86.0 7e-12 seq242 82.4 8e-11 >seq882 Length=11095 Score = 86.0 bits (94), Expect = 7e-12 Identities = 132/186 (71%), Gaps = 2/186 (1%) Strand=Plus/Plus Query 22071 TCACGGGGCAACGTATCGAGAGCGAGATCTTCATAGGACCCACATATTACCACAGACTCA 22130 ||||||| | | ||| | || | |||||||| || || | || ||||| | ||||| Sbjct 2163 TCACGGGCGAGCCCATCCTGTGCTACATCTTCATGGGCCCGATCTACTACCAGAAACTCA 2222 Query 22131 AACATATGGTCAAGGACAAGATGCACGCCCGATCCCACGGCCAGGTGACGACGTTGCAC- 22189 | || ||||||| ||||||||||||||| || | | ||||| | || | | ||| Sbjct 2223 AGCACATGGTCATGGACAAGATGCACGCGCGTGCGCGCGGCCCCCGGGCGGTGCT-CACG 2281 Query 22190 CGGCAGCCGAACTGTGGGCGTGCTCAGGGCGGCGGGCTGCGGTTCGGAGAGATGGAGAAG 22249 |||||||||| | || || | | | |||||| ||||| |||| ||||||||| Sbjct 2282 CGGCAGCCGACCGAGGGCCGCTCGCGCGACGGCGGCCTGCGTCTCGGCGAGATGGAGCGC 2341 Query 22250 GACTGC 22255 |||||| Sbjct 2342 GACTGC 2347 >seq242 Length=30371 Score = 82.4 bits (90), Expect = 8e-11 Identities = 133/189 (70%), Gaps = 2/189 (1%) Strand=Plus/Plus Query 22059 TGTATTGCGGATTCACGGGGCAACGTATCGAGAGCG-AGATCTTCATAGGACCCACATAT 22117 ||||| | ||| |||||| | ||| | | |||| |||||||||| || || || | Sbjct 28852 TGTATAGTGGACACACGGGCCGTCGTTTA-ACAGCGCAGATCTTCATCGGCCCAACGTTC 28910 Query 22118 TACCACAGACTCAAACATATGGTCAAGGACAAGATGCACGCCCGATCCCACGGCCAGGTG 22177 ||||| | | || ||||||||| | |||||||| ||| | || || | ||| | ||| Sbjct 28911 TACCAGCGCTTGAAGCATATGGTCGACGACAAGATCCACTCGCGCTCGCGCGGTCCTGTG 28970 Query 22178 ACGACGTTGCACCGGCAGCCGAACTGTGGGCGTGCTCAGGGCGGCGGGCTGCGGTTCGGA 22237 |||| |||| || ||||| | || ||||||| | || || ||||| | ||| Sbjct 28971 ACGATGTTGACACGCCAGCCCATGGAAGGTCGTGCTCGAGAAGGTGGTCTGCGTATGGGA 29030 Query 22238 GAGATGGAG 22246 ||||||||| Sbjct 29031 GAGATGGAG 29039 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521446812744040