Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950815.1_202016-12-27] 15,153 sequences; 47,142,494 total letters Query= NC_028906.1 Length=75933 Score E Sequences producing significant alignments: (Bits) Value seq480 197 7e-46 >seq480 Length=18429 Score = 197 bits (218), Expect = 7e-46 Identities = 400/592 (68%), Gaps = 9/592 (2%) Strand=Plus/Minus Query 66525 GCCGGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACG 66584 |||| || ||||| ||||||||||| || || || ||| | || || || | Sbjct 5511 GCCGCGTCGTGGAGATCTACGGCCCGGAGAGCTCGGGCAAGACGACGCTCGCGCTGAGCT 5452 Query 66585 CGGTGGCCAATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCC 66644 | || | |||||| || || ||| | ||| | ||||||||| ||||| || Sbjct 5451 GCATCGCGCAGGCGCAGCAGCAGGGCGGCGTCTGCGCGTTCATCGACGCCGAGCATGCCA 5392 Query 66645 TGGACCCTGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGC 66704 | ||| | | ||||||||| |||||| || ||| ||||| | ||| | |||| Sbjct 5391 TCGACGCGCACTACGCCAAGCAGCTCGGCGTCGACATCGACGAGCTCTACATCTCGCAGC 5332 Query 66705 CCGATACCGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGT 66764 |||| | ||||||||||| || ||||||| ||| ||||| ||| |||| || Sbjct 5331 CCGACTCGGGCGAGCAGGCGCTCGAGATCGCCGACACGCTCGTGCGGTCGGGCGCCGTGG 5272 Query 66765 CCATCGTCGTCGTTGACTCCGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACA 66824 | | |||||||| ||| |||||| || || ||||||||||||||||| |||||||| | Sbjct 5271 ACGTGGTCGTCGTCGACAGCGTGGCCGCGCTCGTGCCGCGCGCCGAGCTGGAAGGCGAGA 5212 Query 66825 TCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCACAGGCCATGCGCAAGCTCA 66884 | || ||| || ||| ||||| ||||| |||||| ||||| |||||||||||| Sbjct 5211 TGGGCGACCAGCAGATCGCGCTGCAGGCGCGGCTCATGAGCCAGGCGCTGCGCAAGCTCA 5152 Query 66885 CTGGCACCATCTCCAGCACCAA---CACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGA 66941 | ||| | | || |||| || ||| | ||| | |||||| | ||| ||| Sbjct 5151 CGGGCTCGCTGAGCAAGTCCAACTGCATGCTCA---TCTTTCTGAACCAGATCCGCCAGA 5095 Query 66942 AGATCGGCAACGTGGGCTACGGCCCGAATGAGACCACCACGGGCGGAAAGGCTTTGAGGT 67001 | | |||| | | || |||| || ||| ||| ||||||| | ||| || | | Sbjct 5094 AAGTGGGCATCAT---CTTCGGCTCGCCCGAGGTCACGTCGGGCGGCACGGCGCTGCGCT 5038 Query 67002 TCTACGCCTCAGTCCGTATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGG 67061 |||||| || || || | || | || |||| || | ||||||||||| ||| Sbjct 5037 ACTACGCGTCCGTGCGGCTCGACATTCGCCGCAAGGCGGCGATCAAGGAAGGCGACAAGG 4978 Query 67062 CTGTCGGCAACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCC 67113 ||||||||| | | || ||||| | |||||||||||| || |||| Sbjct 4977 TCGTCGGCAACGAGATCGTCGTCAAGGTGGCCAAGAACAAGCTCGCATCGCC 4926 Score = 179 bits (198), Expect = 2e-40 Identities = 342/500 (68%), Gaps = 13/500 (3%) Strand=Plus/Minus Query 66619 CGCCTACATCGACGCTGAGCACTCCCTGGACCCTGAGTACGCCAAGGCGCTCGGTGTGGA 66678 ||| | ||||||||| ||||| || | ||| | | ||||||||| |||||| || || Sbjct 10578 CGCGTTCATCGACGCCGAGCATGCCATCGACGCGCACTACGCCAAGCAGCTCGGCGTCGA 10519 Query 66679 CCTCGACAACCTCGTGGTGGTTCAGCCCGATACCGGCGAGCAGGCCCTGGAGATCGTTGA 66738 | ||||| | ||| | |||||||| | ||||||||||| || ||||||| || Sbjct 10518 CATCGACGAGCTCTACATCTCCCAGCCCGACTCGGGCGAGCAGGCGCTCGAGATCGCGGA 10459 Query 66739 CCTCCTCGTCAAGTCTGGCGAGCTGTCCA--TCGTCGTCGTTGACTCCGTGGCGGCCCTG 66796 | || || ||| |||| | ||| | | |||||||| ||| |||||| || || Sbjct 10458 CACGCTTGTGCGGTCGGGCG--CCGTCGACGTGGTCGTCGTCGACAGCGTGGCCGCGCTT 10401 Query 66797 GTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGC 66856 ||||||||||||||| | |||||||| || || ||| || ||| ||||| ||||| Sbjct 10400 GTGCCGCGCGCCGAGTTGGAAGGCGAGATGGGCGACCAGCAGATCGCGCTGCAGGCGCGG 10341 Query 66857 CTCATGTCACAGGCCATGCGCAAGCTCACTGGCACCATCTCCAGCACCAA---CACGCTG 66913 |||||| ||||| ||||||||||||| ||| | | || |||| || ||| Sbjct 10340 CTCATGAGCCAGGCGCTGCGCAAGCTCACGGGCTCGCTGAGCAAGTCCAACTGCATGCTC 10281 Query 66914 ACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCAACGTGGGCTACGGCCCGAATGAG 66973 | ||| | |||||| | ||| |||| |||||| | | || ||| || ||| Sbjct 10280 A---TCTTTCTGAACCAGATCCGCCAGAAAGTCGGCATCAT---CTTTGGCTCGCCCGAG 10227 Query 66974 ACCACCACGGGCGGAAAGGCTTTGAGGTTCTACGCCTCAGTCCGTATGGATGTCCGTCGC 67033 ||| ||||||| | ||| || | | |||||| || ||||| | || | || ||| Sbjct 10226 GTCACGTCGGGCGGCACGGCGCTGCGCTACTACGCGTCCGTCCGGCTCGACATTCGCCGC 10167 Query 67034 ATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACCCGGGTGAAGGTCGTC 67093 | || | || || ||||| ||| ||||||||| | | || ||||| | | Sbjct 10166 AAGGCGGCGATCAAAGAGGGCGACAAGGTCGTCGGCAACGAGATCGTCGTCAAGGTGGCC 10107 Query 67094 AAGAACAAGCTGGCCCCGCC 67113 ||||||||||| || |||| Sbjct 10106 AAGAACAAGCTCGCGTCGCC 10087 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242815949150502