Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950835.1_202016-12-27] 11,223 sequences; 35,561,321 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq9 114 1e-20 >seq9 Length=143240 Score = 114 bits (126), Expect = 1e-20 Identities = 383/588 (65%), Gaps = 10/588 (2%) Strand=Plus/Plus Query 16956 ACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAA 17015 ||| ||| || ||||| || || || | ||||| || | ||| || ||||| || | Sbjct 120072 ACAGCAGGCAAGCGAAGTCACAGTGGAGGCCCTCATCACGCGAGATGAGCTCGTTCGAGA 120131 Query 17016 ATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAG 17075 | | | || ||||| || || ||||| | ||| || || | | |||||| || | Sbjct 120132 AGCTGAGGCCAGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGCAGAACGAGCCCG 120191 Query 17076 AAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTT 17135 | ||||| || ||||| |||| || ||||||| | || || || | | |||| | Sbjct 120192 AGAAGAAAATGCCCTCAACGGCAGCGAACGCGACAATGCGCTCAGCAAAAGCCGCG-CGG 120250 Query 17136 TGTTA--CGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTC 17193 | | || | ||| || || |||| | || || | || | ||| || || || Sbjct 120251 CGCGAGTCGCA-CCACTTGAGCGCCCAGTGCGCCTTCTTCTGCACGCATGGAATGGTCTC 120309 Query 17194 TATGGC-CTTAAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTA 17252 ||||| | | | | |||| | | | | |||| | || |||||||| ||||| | Sbjct 120310 GATGGCACGGAGAAGGTGGTTCTTCTCCGTCT-GGTCCTTGATGTACGTATCAATGAGCA 120368 Query 17253 GGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGG 17312 | ||||| || ||||| |||||||| ||||| ||||| || || || ||||| || | Sbjct 120369 GCGAGTACACCTCCGAGTGGATGTTCTCAATGGCGATCTGGAAGCCATAGAAGCAACGCG 120428 Query 17313 CTTCCGCTATTTGAACTTCCACGTAGAATCGTTC--CGCTAGATTTTCGTTCACGATGCC 17370 | || | | || || || | ||| |||| ||| || || ||||| ||||| || Sbjct 120429 CCTCAGGAACCTGCACCTCGCTGCTGAA--GTTCATCGCGAGGTTCTCGTTGACGATACC 120486 Query 17371 GTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATATTTTTCGTCCGGTGTAAG 17430 ||||||||| ||||| ||||| | | ||||| || || | |||| || || Sbjct 120487 GTCGCTCGCCGCGAAGAACGCGAGGACGTGCTTGATAAAGTGGCGCTCGTTGTCCGTGAG 120546 Query 17431 AACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGC 17490 || ||| ||||| | || | | ||| | || |||| |||||| || || || Sbjct 120547 GTTGCCCCAATCCTTGAGGTCGTGCACGAGATCGATCTCCTCGGCGGTCCAGAAGCTCGC 120606 Query 17491 CACTGCCTTTTTATACATATTCCAAATATCATTGTATTGTATGGGGAA 17538 | | ||||| || ||||| | ||| | || || | || || ||||| Sbjct 120607 CTCAGCCTTCTTGTACATCTGCCACACCTCGTTCTCCTGGATCGGGAA 120654 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517472994821640