Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950835.1_202016-12-27] 11,223 sequences; 35,561,321 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq18 109 4e-19 >seq18 Length=101766 Score = 109 bits (120), Expect = 4e-19 Identities = 411/631 (65%), Gaps = 13/631 (2%) Strand=Plus/Minus Query 18594 CGATACAATTTGCGA---AATGAATTTCCTCTTTTAACTACAAAGCGTGTTTTTTGGAGG 18650 |||| |||||||||| |||| ||||| || | || || ||||| || || ||| | Sbjct 82856 CGATTCAATTTGCGAGATAATGTTTTTCCGCTGCTCACGACCAAGCGCGTCTTCTGGCGC 82797 Query 18651 GCCGTCGTGGAAGAGTTGTTATGGTTTATCCGCGGGTCAACCGATTCCAAAGAACTCGCC 18710 | |||| ||| ||| || | ||||| ||| | || ||| || |||| || | || Sbjct 82796 GGTGTCGCGGAGGAGCTGCTGTGGTTCATCAGTGGCGATACCAATGCCAA-GACATTGCA 82738 Query 18711 GCTAAAGA-TATACACATATGGGATATATACGGATCGAGCAAATTTCTAAATAGGAATGG 18769 | ||| ||| | || |||||| | ||||||| ||| ||| | || | || Sbjct 82737 GGACAAGGGTATCAAGATCTGGGATGGCAATGGATCGAAGGAATACCTAGAGAGCATCGG 82678 Query 18770 CTTCCATAAAAGACACACGGGGGACCTTGGCCCCATTTACGGCTTCCAGTGGAGACATTT 18829 | || | | | | || || ||||| || | || |||||||||||| | || || Sbjct 82677 CCTCGGACATCGCGAAGCTGGCGATCTTGGACCAGTGTATGGCTTCCAGTGGCGCCACTT 82618 Query 18830 TGGAGCGGAATATAAAGACTGT-CAATCAAACTATTTACAGCAAGGAATCGATCAGCT-G 18887 |||||| | || | ||| | || | |||| | || ||| |||| ||||| | Sbjct 82617 TGGAGCCAAGTACAC-GACGATGCACGCCGACTACTCTGGCCAGGGAGTCGACCAGCTCG 82559 Query 18888 CAAACTGTTATAGATACAATTAAAACAAACCCAGAAAGC-CGACGAATGATTATATCGTC 18946 | | || || | | | | || || ||||| ||| | || || || || || ||| | Sbjct 82558 CGGAG-GTGATCCAAAAACTCAAGACGAACCC-GAACGATCGGCGCATCATCATGTCGGC 82501 Query 18947 TTGGAATCCAAAGGATATCCCCTTAATGGTACTACCTCCATGTCACACGTTATGTCAGTT 19006 ||||| || ||| || |||| || || || || |||| ||| || ||||| Sbjct 82500 ATGGAACCCTGCGGACCTCAAGGAGATGGCTCTGCCGCCGTGCCACATGTTCTGCCAGTT 82441 Query 19007 TTACGTTGCAAACGGTGAATTATCCTGCCAAGTATACCAGAGATCGGGGGATATGGGCCT 19066 ||||||||| || ||||| | ||||| || | ||||| | || | |||||||| || Sbjct 82440 TTACGTTGCGAATGGTGAGCTCTCCTGTCAGATGTACCAACGCTCAGCAGATATGGGTCT 82381 Query 19067 TGGGGTACCGTTCAACATTGCTGGATATGCACTTCTTAC-CTACATAGTAGCGCATGTTA 19125 || || || |||||||| || | || || || | || | || | || ||||| || | Sbjct 82380 CGGCGTGCCATTCAACATCGCGAGCTACGCGCTGTTGACGCGAC-TCGTCGCGCAGGTCA 82322 Query 19126 CAGGACTTAAAACCGGAGATTTAATTCATACAATGGGGGATGCACATATTTACTTGAATC 19185 |||| || | || || || || || || || || || || || || ||| || | | Sbjct 82321 CAGGGCTGCGTGCTGGCGAGTTCATCCACACGATTGGTGACGCGCACATCTACCTGGACC 82262 Query 19186 ATATAGATGCTTTAAAAGTGCAGCTAGCTCG 19216 || | || | | || |||||||| | ||| Sbjct 82261 ATGTCGAGCCCCTCAAGGTGCAGCTTGGTCG 82231 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399449355718035