Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950835.1_202016-12-27] 11,223 sequences; 35,561,321 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq18 235 6e-57 >seq18 Length=101766 Score = 235 bits (260), Expect = 6e-57 Identities = 422/602 (70%), Gaps = 12/602 (2%) Strand=Plus/Plus Query 145672 AGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGG 145731 ||||| | ||| |||||||| || |||| ||||||| ||||||||| || | |||| Sbjct 82237 AGCTGCACCTTGAGGGGCTCGACATGGTCCAGGTAGATGTGCGCGTCACCAATCGTGTGG 82296 Query 145732 ATGAAGTCCCCGGGCTCGAGGCCC-GTGAGGTGGGCGACCATGTAG-GTCAGCAGGGAGT 145789 ||||| || || | | || |||| |||| || ||||| | || | |||| ||| | || Sbjct 82297 ATGAACTCGCCAG-CACGCAGCCCTGTGACCTGCGCGACGA-GTCGCGTCAACAGCGCGT 82354 Query 145790 AGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGC 145849 |||| || |||||||| ||||| || || ||||| || | ||||| ||||||| ||| | Sbjct 82355 AGCTCGCGATGTTGAATGGCACGCCGAGACCCATATCTGCTGAGCGTTGGTACATCTGAC 82414 Query 145850 AGGAGAGCTCCCCGCCCGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCA 145909 |||||||||| || ||| ||||| |||||||| | | |||||| |||||||| |||| Sbjct 82415 AGGAGAGCTCACCATTCGCAACGTAAAACTGGCAGAACATGTGGCACGGCGGCAGAGCCA 82474 Query 145910 TGGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTC-TCGGGGTTC 145968 | | |||||||| |||||||| || | | || || | || | || | |||||| Sbjct 82475 TCTCCTTGAGGTCCGCAGGGTTCCATGCCGACATGATGATGCGCC-GATCGTTCGGGTTC 82533 Query 145969 CTCTTGATCTCCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTC 146028 |||||| | |||| ||| ||||||||| || ||||| || ||| || | | Sbjct 82534 GTCTTGAGTTTTTGGATCACCTCCGCGAGCTGGTCGACTCCCTGGCCAGAGTAGTC-GGC 82592 Query 146029 TTGGA--GTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCA 146086 || | || | |||| ||| || ||||| | ||||||||| || || || || || | Sbjct 82593 GTGCATCGT-CGTGTACTTGGCTCCAAAGTGGCGCCACTGGAAGCCATACACTGGTCCAA 82651 Query 146087 GGTCCCCGGGCTCCCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGG 146146 | || || | || | || || || ||| | | ||| | ||| || || ||| Sbjct 82652 GATCGCCAGCTTCGCGATGTCCGAGGCCGATGCTCTCTAGGTATTCCTTCGATCCATTGC 82711 Query 146147 CGTCCCAGATCTTGACGCCCCT-CGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATG 146205 | ||||||||||||| ||| | | | | || |||| | || || |||||| Sbjct 82712 CATCCCAGATCTTGATACCCTTGTCCTGCAATGTC-TTGGCATTGGTATCGCCACTGATG 82770 Query 146206 AACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGG 146265 ||||| |||||||| || ||| || | ||||||||| | |||||| || ||||| || Sbjct 82771 AACCACAGCAGCTCCTCCGCGACACCGCGCCAGAAGACGCGCTTGGTCGTGAGCAGCGGA 82830 Query 146266 AA 146267 || Sbjct 82831 AA 82832 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589994019600920