Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950835.1_202016-12-27] 11,223 sequences; 35,561,321 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq18 145 5e-30 >seq18 Length=101766 Score = 145 bits (160), Expect = 5e-30 Identities = 376/565 (67%), Gaps = 15/565 (3%) Strand=Plus/Plus Query 25413 AGCTGAGTCTTCAGCGGTTCTACGTGATCCAGGTAGACGTGAGCGTCTCCCAGAGTGTGG 25472 ||||| ||| || || || || || |||||||||| ||| ||||| || | |||||| Sbjct 82237 AGCTGCACCTTGAGGGGCTCGACATGGTCCAGGTAGATGTGCGCGTCACCAATCGTGTGG 82296 Query 25473 ACAAACTCTCCCGGTTCTAGCCCGGTAACGTAAGCCATCATGTACGTGAGGAGAAAGTAG 25532 | ||||| || | ||||| || || | || | | ||| | || |||| Sbjct 82297 ATGAACTCGCCAGCACGCAGCCCTGTGACCTGCGCGACGAGTCGCGTCAACAGCGCGTAG 82356 Query 25533 CTGGCGATGTTAAAGGGTACCCCGAACCCCATGTCCCCCCGACCTCTGGTAGAGCTGACA 25592 || |||||||| || || || |||| ||||| || | || | ||||| | |||||| Sbjct 82357 CTCGCGATGTTGAATGGCACGCCGAGACCCATATCTGCT-GAGCGTTGGTACATCTGACA 82415 Query 25593 CGAGAGCTCTTCGT-CGCTCACGTAAAACTGACACATGGTGTAGCACGGAGGAAGAGCTA 25651 |||||||| | | ||| ||||||||||| || | ||| |||||| || ||||| | Sbjct 82416 GGAGAGCTCACCATTCGCA-ACGTAAAACTGGCAGAACATGTGGCACGGCGGCAGAGCCA 82474 Query 25652 TAAGGCCCAAGTCTTTAGGGTTCCAGGCGCACACGATGATGCACCTGTCTTCTGGGTTGT 25711 | | ||| ||||||||| || ||| |||||||| || || | ||||| Sbjct 82475 TCTCCTTGAGGTCCGCAGGGTTCCATGCCGACATGATGATGCGCCGATCGTTCGGGTTCG 82534 Query 25712 CCCTGA----TAAGATCCGCGGTGTTTTGC-AGCTGATCCACCCCCATCCCCGAGTAGTC 25766 | ||| | |||| | | || ||||| || || ||| || |||||||| Sbjct 82535 TCTTGAGTTTTTGGATCACC-----TCCGCGAGCTGGTCGACTCCCTGGCCAGAGTAGTC 82589 Query 25767 TGCCCTCATGTCCGTGTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCC 25826 || ||| |||||||| ||||| || | | ||||||||| || ||||| ||||| Sbjct 82590 GGCGTGCATCGTCGTGTACTTGGCTCCAAAGTGGCGCCACTGGAAGCCATACACTGGTCC 82649 Query 25827 TAGGTCTCCATCTTCCCTGTGCTCAAAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATT 25886 || || ||| |||| | || | | ||| | | || | | || | || ||||| Sbjct 82650 AAGATCGCCAGCTTCGCGATGTCCGAGGCCGATGCTCTCTAGGTATTCCTTCGATCCATT 82709 Query 25887 GGCGTCCCAGATCTTTACCCCCTTCT-CGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGA 25945 | | ||||||||||| | ||||| | | | | || |||| || || || |||| Sbjct 82710 GCCATCCCAGATCTTGATACCCTTGTCCTGCAATGTC-TTGGCATTGGTATCGCCACTGA 82768 Query 25946 CGAACCACAGCAGCTCCGCCGTGAC 25970 |||||||||||||||| ||| ||| Sbjct 82769 TGAACCACAGCAGCTCCTCCGCGAC 82793 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340091075872779