Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950835.1_202016-12-27] 11,223 sequences; 35,561,321 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq1222 82.4 6e-11 >seq1222 Length=6011 Score = 82.4 bits (90), Expect = 6e-11 Identities = 135/192 (70%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 48535 CTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTCCTCCAGCTGCTTACCGCCGT 48593 |||||| || |||||||| || | || || || ||||||| ||||||||||| || Sbjct 2174 CTCCTTCTGGATGTTGTAGTCCGA-AAGGGTGCGGCCGTCCTCGAGCTGCTTACCAGCGA 2116 Query 48594 AAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAG 48653 | || | |||||||||||| || | | ||||||||| || |||||||||| | Sbjct 2115 AGATCAGGCGCTGCTGATCCGGAGGGATTCCCTCCTTGTCCTGGATCTTCTGCTTGACAT 2056 Query 48654 ACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCA 48713 | ||| | || | || ||| |||| || || || || ||||| ||||| || | Sbjct 2055 TGTCAATGCTGTCCGAAGGCTCGACGTCGAGCGTGATCGTCTTGCCGGTCAGAGTCTTGA 1996 Query 48714 CAAAAATCTGCA 48725 | || ||||||| Sbjct 1995 CGAAGATCTGCA 1984 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421193581129223