Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950835.1_202016-12-27] 11,223 sequences; 35,561,321 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq2426 425 1e-113 >seq2426 Length=2661 Score = 425 bits (470), Expect = 1e-113 Identities = 1145/1731 (66%), Gaps = 38/1731 (2%) Strand=Plus/Plus Query 363448 GAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGAT 363507 || || |||||||| ||| | ||||||| || | || ||||| | || |||| Sbjct 778 GAGCGTCCGCAGCAGATGATTCTGCGTGTCGCGGTCGGCATCCACAAGCACGACATTGAC 837 Query 363508 GCCGCGATTGAAACATATAAGCTTCTAAGT-GCTC-GTGTATTCACGCACGCCACGCCAA 363565 |||||| | || || || || | | || || | | ||||||||||| ||||| | Sbjct 838 GCCGCGCTCGAGACGTACGAG--TACATGTCGCAAAGCTTCTTCACGCACGCGACGCCGA 895 Query 363566 CAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGA 363625 | ||| ||| || || || | || ||| |||| || ||||| || || |||| Sbjct 896 CGCTGTTCAACGCGGGCACGCCGCGCCCGCAGCTGTCGTCGTGCTTCCTGCTCGCCATGA 955 Query 363626 AGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGA 363685 ||||||| || |||||||| |||| ||||| || ||| | || || || |||||| Sbjct 956 AGGACGACTCGATCGAGGGCATCTACGACACGCTCAAGCAGTGCGCGTGCATCTCCAAGT 1015 Query 363686 ATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGCACAGAACAGTTACATTCGC 363744 || ||||| || || || | || | ||||| | || || ||| ||||| ||| Sbjct 1016 GGGCTGGCGGCATCGGCGTCAGCG-TGCACAACATCCGCGCGACCAACTCGTACATCCGC 1074 Query 363745 GGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCG 363804 ||||| || | ||||| || || || |||||||| || || || || | || ||| Sbjct 1075 GGCACGAACGGCTCGTCGAACGGCCTCGTGCCCATGCTGCGCGTCTTCAACGACACGGCG 1134 Query 363805 AGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCT 363864 | |||||||||||||| || || |||||||| || |||| || ||||| || ||||| Sbjct 1135 CGCTACGTCGACCAGGGCGGCGGCAAGCGCAAGGGCTCGTTCGCGATGTACCTGGAGCCG 1194 Query 363865 CATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTG 363924 || ||||| || || ||||| || || ||| ||| ||| || || ||| Sbjct 1195 TGGCACGCCGACATCTTCGAGTTCCTGGACCTCAAGAAGAACCACGGCAACGAGCTGCAC 1254 Query 363925 CGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAG 363984 || || |||||||| ||||| || | ||| | | || | || ||||||||||| ||| Sbjct 1255 CGCGCGCGTGATCTCTTCTACGCGATGTGGATCCCCGATCTCTTCATGAAGCGCGTCGAG 1314 Query 363985 GCA---GGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCC--GATG 364039 || || || ||| || || ||||| |||| || || || | | || | Sbjct 1315 GCCAACGGCGAG---TGGAGCCTGTTCTGCCCGAACGAGGCGCCGGGGCTCTACACGACG 1371 Query 364040 TATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTA 364099 | |||| ||||| | | || || ||| | |||| || ||||| || || | Sbjct 1372 T--GGGGCGACGAGTTCGAGGCGCTGTACCACCAGTACGAGCGCGAGGGCCGCGCGCGCA 1429 Query 364100 AGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAA 364159 |||| || | ||| ||| |||| ||||| || ||| | || |||||||| |||||||| | Sbjct 1430 AGACGATCCGCGCGCAGCAGCTCTGGTTCGCGATCCTCGAGTCGCAGATCGAGACAGGCA 1489 Query 364160 CACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTA 364219 | || || ||| ||||||| || ||||||||||||||||| ||||||||| |||| || | Sbjct 1490 CGCCGTACATGCTGTACAAGGACTCGTGCAACCGCAAGTCGAACCAGCAGAACCTCGGCA 1549 Query 364220 CAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTG 364279 | || | ||||||||| || |||| | | || ||||| | ||||| ||| | Sbjct 1550 CGATCCGCTCGAGCAACCTCTGCTGCGAGGTGCTCGAGTACACGTCGCCCGATGAGGTCG 1609 Query 364280 CCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAA---AAGATGGTACTTTTG 364336 | || || ||||| ||||| |||||||| | |||||| | | || || |||| Sbjct 1610 CGGTGTGCAACCTCGCGTCCATCGCGCTGTCCAAGTTTGTGACCGACGACAAGACCTTTG 1669 Query 364337 ACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTTATCG 364396 || | || | || || ||| | ||| | | || |||| || ||||||| |||| Sbjct 1670 ACTTCAAGAAGCTCTACGACATCACCAAGGTCGTCACGCGCAACCTGAACAAGGTCATCG 1729 Query 364397 ACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGCCCGATTG 364456 ||| || || || || || || || |||||||| || |||| || |||||||| | Sbjct 1730 ACATCAACTACTACCCGATCCCCGAGGCCGAGCGCAGCAACCTGCGCCACCGCCCGATCG 1789 Query 364457 GTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAG---ATGGCATTTGA-T 364512 | | || || ||||| ||||| |||| | | || |||| | || || || Sbjct 1790 GCATCGGCGTGCAGGGTCTCGCGGACGCGT---TCATCCTCATGGGCTACGCGTTCGAGA 1846 Query 364513 TCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATG 364572 || | || || || | || || ||| | ||||| || || |||| |||| ||| ||| Sbjct 1847 GCGAC-GAGGCCCGCGAGCTCAACAAGAACATCTTCGAGACGCTGTACTTTGGCGCCATG 1905 Query 364573 ACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCT 364632 || ||| || | || | || |||| | || ||||| || || Sbjct 1906 GAGGCCTCGATGGAGCTCGCGCGGGAGCATGGCCCGTACGGCAGCTACGAGGGTTCGCC- 1964 Query 364633 CTTTCGC-AGGGAAAATTCCAGTTTGATCTATGGAATGTCACGC---CATCTGTCCGATG 364688 | | || |||| | |||||||| || | ||| ||||||| | || | | || Sbjct 1965 CGTGAGCAAGGGCATCTTCCAGTTCGACATGTGGGGCGTCACGCCGACGTCGGGTCTCTG 2024 Query 364689 GAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTAC 364748 | |||||| |||| | | ||| | || | || |||||||| || | Sbjct 2025 GGACTGGGCCGCGCTCAAGGCGAGCGTCGCGCAGTACGGCGTGCGCAACTCGCTGCTGCT 2084 Query 364749 AGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACC 364808 ||||| ||||| ||||| || ||||| ||||||||||| |||||||||| |||| || Sbjct 2085 CGCGCCGATGCCGACGGCGTCGACTGCGCAGATCCTCGGCAACAACGAGTCGATCGAGCC 2144 Query 364809 GTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAA 364868 ||| || | ||| | || ||||| || || |||| || || || | || || || Sbjct 2145 GTTCACGACCAACATGTACAACCGCCGCGTGCTCGCCGGCGAGTTCACGATCGTGAACAA 2204 Query 364869 GTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATAT 364928 |||||| | ||||| || ||| | ||| | ||| | || ||| | || Sbjct 2205 GTACCTCATGAAGGAGCTCATCGAGCTCGGCATCTGGACGCCCGAGGTGCGCAACCAGAT 2264 Query 364929 CATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTAT 364988 | || || | || || ||||||||| | | | | || || | ||||| | Sbjct 2265 CCTCCACGACCACGGCTCGGTGCAGAACGTGCGCGTGATCCCGGACGCCGTGAAGGAGAA 2324 Query 364989 TTACAAAACCGTATGGGAAATTTCCATGC-GAA--CTCTCATTGATATGGCGGCCGATCG 365045 ||||| ||||| ||||| || || || ||| || | |||| ||||| || || || Sbjct 2325 GTACAAGACCGTGTGGGAGAT---CAAGCAGAAGGCTGTGCTTGACATGGCCGCTGACCG 2381 Query 365046 CGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCGC 365105 ||| || | ||||| |||||||||||| | ||||| ||| | |||| || | Sbjct 2382 CGGCGCCTACATCTGCCAGAGCCAGTCGCTCAACGTGCACATCGCGGAGCCGACGATCAG 2441 Query 365106 CAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156 |||||| || |||||||| ||||||| |||||| ||||| ||||| || Sbjct 2442 CAAGCTGACGTCCATGCACTTCTACGCGTGGAAGAAGGGTCTCAAGACGGG 2492 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303166184676386