Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950835.1_202016-12-27] 11,223 sequences; 35,561,321 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq2426 257 2e-63 seq9 210 3e-49 seq79 93.3 5e-14 >seq2426 Length=2661 Score = 257 bits (284), Expect = 2e-63 Identities = 1118/1744 (64%), Gaps = 61/1744 (3%) Strand=Plus/Minus Query 113597 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGAC 113656 || ||||||||||| ||||||||||| |||| |||||| || || | ||||| || | | Sbjct 2507 CGCAGGTAGTACATGCCCGTCTTGAGACCCTTCTTCCACGCGTAGAAGTGCATGGACGTC 2448 Query 113657 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 113716 | |||| || || || | ||| | ||| | ||| || |||| || Sbjct 2447 AGCTTGCTGATCGTCGGCTCCGCGATGTGCACGTTGAGCGACTGGCTCTGGCAGATGTAG 2388 Query 113717 CGTCCACGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTTCTG 113776 || || || || ||||| |||| |||| ||||| |||||| |||||||| || || Sbjct 2387 GCGCCGCGGTCAGCGGCCATGTCAAGCACAGCCTTCTGCTTGATCTCCCACACGGTCTTG 2328 Query 113777 TAGAGGTTCTTAATATCATCTGGGATATC---CACGATATTTTGGATGGAGCCACCCGCC 113833 || | ||| | | || ||||| | |||| || || | ||||| | Sbjct 2327 TACTTCTCCTTCACGGCGTCCGGGATCACGCGCACG---TTCTGCACCGAGCCGTGGTCG 2271 Query 113834 TTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACG 113893 | || || | | || || | ||||| || | || |||| |||| || | Sbjct 2270 TGGAGGATCTGGTTGCGCACCTCGGGCGTCCAGATGCCGAGCTCGATGAGCTCCTTCATG 2211 Query 113894 AGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTC 113953 || | ||| || || | ||||| || ||||| ||| | || || |||||| Sbjct 2210 AGGTACTTGTTCACGATCGTGAACTCGCCGGCGAGCACGCGGCGGTTGTACATGTTGGTC 2151 Query 113954 GTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATG 114013 ||| | ||||| | |||| ||||| || | ||| || || || || || || ||||| Sbjct 2150 GTGAACGGCTCGATCGACTCGTTGTTGCCGAGGATCTGCGCAGTCGACGCCGTCGGCATC 2091 Query 114014 GGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCC 114073 || || | || || ||| || | || | | | | || ||||||| ||| || Sbjct 2090 GGCGCGAGCAGCAGCGAGTTGCGCACGCCGTACTGCGCGACGCTCGCCTTGAGCGCGGCC 2031 Query 114074 CAGTCGTAGTTGAGCTTTGTC-TCCCCCTG-----CCACATATCAAACTGGAGGATACCT 114127 ||||| || || | | | || | || |||||| || ||||||| ||| || Sbjct 2030 CAGTCCCAGA-GACCC--GACGTCGGCGTGACGCCCCACATGTCGAACTGGAAGATGCCC 1974 Query 114128 TGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATTCG--- 114184 | | | ||||| ||||| | | |||| ||||| | || ||| | || Sbjct 1973 TTGCTCACGGGCGAACCCTCGTAGCTGCCGTACGGGCCATGCTCCCGCGCGAGCTCCATC 1914 Query 114185 GAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTG 114244 ||| ||||| | ||| | |||| ||||| || ||| || | | | Sbjct 1913 GAG---GCCTCCATGGCGCCAAAGTACAGCGTCTCGAAGATGTTCTTGTTGAGCTCGCGG 1857 Query 114245 GCCTCGTCGGAATCAAACGCG-AGTCGGCACAAA-ATAAATACATCCGCGAGACCTTGGA 114302 ||||||||| || |||||| || | || | || || | ||||||||||| || | Sbjct 1856 GCCTCGTCGCTCTCGAACGCGTAGCC--CATGAGGATGAACGCGTCCGCGAGACCCTGCA 1799 Query 114303 CACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACG---GGAT 114359 | |||| ||| || ||||| || | || || | || ||| ||| | || | Sbjct 1798 CGCCGATGCCGATCGGGCGGTGGCGCAGGTTGC---TGCGCTCGGCCTCGGGGATCGGGT 1742 Query 114360 AAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAA 114419 | | || | ||||| ||| | || || || ||||| ||||| ||||| || | | Sbjct 1741 AGTAGTTGATGTCGATGACCTTGTTCAGGTTGCGCGTGACGACCTTGGTGATGTCGTAGA 1682 Query 114420 GCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACG 114479 |||| | | | ||||| | | || || | ||| |||| | || ||||| |||| Sbjct 1681 GCTTCTTGAAGTCAAAGGTCT---TGTCGTCGGTCACAAACTTGGACAGCGCGATGGACG 1625 Query 114480 CCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAAT 114539 | || || ||||| | | |||||| |||||||| | | || || | | Sbjct 1624 CGAGGTTGCACACCGCGACCTCATCGGGCGACGTGTACTCGAGCACCTCGCAGCAGAGGT 1565 Query 114540 TTGAACTCTTA---ATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCT 114596 | ||| || ||||| | ||||| || || ||||| ||| |||| |||| Sbjct 1564 TG---CTCGAGCGGATCGTGCCGAGGTTCTGCTGGTTCGACTTGCGGTTGCACGAGTCCT 1508 Query 114597 TGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGACAT 114656 |||| |||||||| ||||| || ||||| | || |||| ||| || || ||||| Sbjct 1507 TGTACAGCATGTACGGCGTGCCTGTCTCGATCTGCGACTCGAGGATCGCGAACCAGA--- 1451 Query 114657 CGGCGGCTG-GCACAG-TGGCGTTG---GCTCGCCCCTCCTCCTCGTACTTTGTGTAGAG 114711 || |||| || | | | | ||| || || ||||| |||||||| ||| || Sbjct 1450 --GCTGCTGCGCGCGGATCGTCTTGCGCGCGCGGCCCTCGCGCTCGTACTGGTGGTACAG 1393 Query 114712 GGCTTCAAACTCTTCACCC-ACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGA 114770 || || ||||| || ||| ||| | | | ||||||| || |||| | |||||||| | Sbjct 1392 CGCCTCGAACTCGTCGCCCCACGTCGTGT-AGAGCCCCGGCGCCTCGTTCGGGCAGAACA 1334 Query 114771 GAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTG 114830 | ||| | || |||| || |||||||||||||| || |||||||| | || Sbjct 1333 GGCTCCACTCGCCGTTGGCCTCGACGCGCTTCATGAAGAGATCGGGGATCCACATCGCGT 1274 Query 114831 AGAAGAGATCCCGACAGCGA-GCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAG 114889 |||||||||| || ||| || || | | || || || | |||| || Sbjct 1273 AGAAGAGATCACGCGCGCGGTGCAGCT-CGTTGCCGTGGTTCTTCTTGAGGTCCAGGAAC 1215 Query 114890 TCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGA---CGA 114946 || | ||| || ||||||||||| |||||||||| ||||| || ||||| || | Sbjct 1214 TCGAAGATGTCGGCGTGCCACGGCTCCAGGTACATCGCGAACGAGCCCTTGCGCTTGCCG 1155 Query 114947 CCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCA 115006 || |||||| || || | ||| ||| | || || ||||| ||||| || | || || Sbjct 1154 CCGCCCTGGTCGACGTAGCGCGCCGTGTCGTTGAAGACGCGCAGCATGGGCACGAGGCCG 1095 Query 115007 TCAGATTGGCCATTTGTCCCCCGAAT--ACGAGACTTATTGGCTCTGACATCATGGATGT 115064 | || ||| || || || || || ||||| || | || | || | || | | Sbjct 1094 TTCGACGAGCCGTTCGTGCCGCGGATGTACGAG--TTGGTCGCGCGGATGTTGTGCACGC 1037 Query 115065 GCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGA 115124 | || || || || |||||||| ||||| |||||||| | |||| || |||||| Sbjct 1036 TGACGCCGATGCCGCCAGCCCACTTGGAGATGCACGCGCACTGCTTGAGCGTGTCGTAGA 977 Query 115125 TCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTTG 115184 | || ||||||||||| |||| | |||| |||||||| ||||| || || | | Sbjct 976 TGCCCTCGATCGAGTCGTCCTTCATGGCGAGCAGGAAGCACGACGACAGCTGCGGGCGCG 917 Query 115185 GTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTAT 115244 | || || |||||||| || || || |||||||| |||| | | ||| ||||| | | Sbjct 916 GCGTGCCCGCGTTGAACAGCGTCGGCGTCGCGTGCGTGAAGAAGCTTTGCGACATGTACT 857 Query 115245 CGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAA 115304 |||| ||||| | ||||| |||||| | | ||| || |||| || ||| |||| || Sbjct 856 CGTACGTCTCGAGCGCGGCGTCAATGTCGTGCTTGTGGATGCCGACCGCGACACGCAGAA 797 Query 115305 ACAT 115308 ||| Sbjct 796 TCAT 793 >seq9 Length=143240 Score = 210 bits (232), Expect = 3e-49 Identities = 407/589 (69%), Gaps = 20/589 (3%) Strand=Plus/Plus Query 125752 CTTGCCGTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATT 125811 |||| ||| || ||||| ||||||||||||||||| ||||| || | | ||| | Sbjct 119788 CTTGGAGTACTCGCCAACGCGCTTCTCGAAGAAGTTGGTCTTGCCCTGGAGCGAGATCAT 119847 Query 125812 CTCCATAAAATCAAATGGGTTCTTTGAG---TTCCAAATTGTTGGC-ACCCCAATCTGTT 125867 ||||| | ||||| |||||| ||| || |||| ||||| || |||| | | Sbjct 119848 GTCCATCCAGTCAAACGGGTTC---GAGACCTTGTAAATC-TTGGCGACACCAAGCGCAT 119903 Query 125868 TGAGGAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGA 125927 |||||| ||||| | | | |||| ||||||| |||| | |||||||| |||| Sbjct 119904 GGAGGAGGCGATCGGCGCAGAACTCGATGTACTGGCACATAAGCGACGAGTTCATGCCGA 119963 Query 125928 TGAGGTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCA 125987 | || | || |||| |||| || |||| |||||||||| | ||||| || || | Sbjct 119964 TCAGCTCGACCGGAAGCGAGTCCTGGACGAACTCCTTCTCAATCGCGACGGCATCGCGAA 120023 Query 125988 CGATGGCGTGAATGGTGTCCACCCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCAC-G 126046 ||| | || ||| | || || || | | ||| |||| |||| | | | Sbjct 120024 TGATCTCATGGATGCG--CGACTCCGGGAGCTTGTTGACAAG-CTTG--GAGTACAGCAG 120078 Query 126047 GCAAAC----TCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAG 126102 |||| | || |||||| ||||| ||||| |||||||| || |||||||||| || Sbjct 120079 GCAAGCGAAGTCACAGTGGAGGCCCTCATCACGCGAGATGAGCTCGTTCGAGAAGCTGAG 120138 Query 126103 TCCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAA 126162 || ||||||||||| |||||||| | |||||| || | || || || ||||||||||| Sbjct 120139 GCCAGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGCAGAACGAGCCCGAGAAGAA 120198 Query 126163 GATTCCCTCCACACACGCGAACGCAAAGAGACGCTCAGC-AAAGGAGCGCGACTTTGTGT 126221 || ||||| || |||||||| | | |||||||| |||| ||||| | | || Sbjct 120199 AATGCCCTCAACGGCAGCGAACGCGACAATGCGCTCAGCAAAAGCCGCGCGGC-GCGAGT 120257 Query 126222 CAAACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTT 126281 | ||||||| | |||||| |||||||| |||| | || || | ||||| ||| || Sbjct 120258 CGCACCACTTGAGCGCCCAGTGCGCCTTCTTCTGCACGCATGGAATGGTCTCGATGGCAC 120317 Query 126282 CAAAGAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAG 126330 | || | ||||| || | | || ||||||||| |||| ||||| Sbjct 120318 GGAGAAGGTGGTTCTTCTCCGTCTGGTCCTTGATGTACGTATCAATGAG 120366 >seq79 Length=46062 Score = 93.3 bits (102), Expect = 5e-14 Identities = 119/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 172808 AGAGGGAACACACCGTAGTGATCACGACCAACCACAGAAAGACCAGCAACTGCGAGGGTC 172867 || || ||||||||||| | ||||| ||||| || || || ||| | ||||| |||| Sbjct 11088 AGTGGAAACACACCGTAATAGTCACGTCCAACAACGGAGAGTCCACTGATTGCGAAGGTC 11029 Query 172868 TTCGCGGAATCACCCTCCGTCACGATGAGCGTACACTTTCCAGATTGTGCCGTCCCCGCC 172927 || || || || ||||| |||| |||||||| || ||| | | || || || || Sbjct 11028 TTGGCTGATTCGCCCTCAGTCAAAATGAGCGTGCAGTTTTGACCCTTCGCTGTACCAGCG 10969 Query 172928 TTGTTCGCATCGTCCAACTTGGGAATACCAGTAATTTTGGACTT 172971 | |||||||||||| | ||| ||||| || || | || ||||| Sbjct 10968 TAGTTCGCATCGTCGAGCTTCGGAATTCCGGTGAGCTTCGACTT 10925 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597269798756840