Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950835.1_202016-12-27] 11,223 sequences; 35,561,321 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq1222 105 7e-18 >seq1222 Length=6011 Score = 105 bits (116), Expect = 7e-18 Identities = 163/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| | ||||| || || | |||||| || || || |||||||| || | Sbjct 2210 ACCACCACGCAGGCGGAGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGA 2151 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | |||||| |||| || |||||||| || || | || || |||||||| || ||||| Sbjct 2150 AAGGGTGCGGCCGTCCTCGAGCTGCTTACCAGCGAAGATCAGGCGCTGCTGATCCGGAGG 2091 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCA--CTGTATCACCGGCGTCC 64393 ||||| || || || || || || ||||| ||| || | |||| | ||| || Sbjct 2090 GATTCCCTCCTTGTCCTGGATCTTCTGCTTGACATTGTCAATGCTGTCCGAA-GGC-TCG 2033 Query 64394 ACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCA 64442 || || | || | ||||||||||||| ||| || ||||| || |||| Sbjct 2032 ACGTCGAGCGTGATCGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCA 1984 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499574706080120