Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950835.1_202016-12-27] 11,223 sequences; 35,561,321 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq2426 502 2e-137 >seq2426 Length=2661 Score = 502 bits (556), Expect = 2e-137 Identities = 1238/1861 (67%), Gaps = 56/1861 (3%) Strand=Plus/Plus Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGG 93777 ||||| ||||||| |||||| || || |||||||||||||||||| | | |||| | Sbjct 712 TACGACTACTTTGGCTTCAAGACGCTCGAGAAGTCGTACCTCCTCCGCGTCGGCGGCAAG 771 Query 93778 GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGAC 93837 || | ||||| ||||| ||| || | |||| ||||| |||| || ||| |||||| Sbjct 772 GTCGCGGAGCGTCCGCAGCAGATGATTCTGCGTGTCGCGGTCGGCATCCACAAGCACGAC 831 Query 93838 AT----GCCGAATGTTTTGCGGGCTTTCAGAG-ACATGCGGGACAAGAGGTATACCATG- 93891 || |||| | | || | | ||| ||||| | ||| || | || | Sbjct 832 ATTGACGCCGC--GCT---CGAGACGTACGAGTACATGTCG--CAA-AGCTTCTTCACGC 883 Query 93892 --GCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCC 93949 || || ||||| |||||||||||||| || ||| || ||| |||| ||||| |||| Sbjct 884 ACGCGACGCCGACGCTGTTCAACGCGGGCACGCCGCGCCCGCAGCTGTCGTCGTGCTTCC 943 Query 93950 TGATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGA 94009 || | | | |||| |||||| ||| || || | ||||| |||||| | || ||| Sbjct 944 TGCTCGCCATGAAGGACGACTCGATCGAGGGCATCTACGACACGCTCAAGCAGTGCGCGT 1003 Query 94010 CCATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTT 94069 |||||| || | || || || ||||| |||| || ||| || | || || | | Sbjct 1004 GCATCTCCAAGTGGGCTGGCGGCATCGGCGTCAGCGTGCACAACATCCGCGCGACCAACT 1063 Query 94070 CCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCA 94129 | ||||||||||| || || ||| | || ||||||||||| || ||||| || ||||||| Sbjct 1064 CGTACATCCGCGGCACGAACGGCTCGTCGAACGGCCTCGTGCCCATGCTGCGCGTCTTCA 1123 Query 94130 ACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCT 94189 || || ||||||||||||| |||||||| || || | | | ||||| || |||||| | | Sbjct 1124 ACGACACGGCGCGCTACGTCGACCAGGGCGGCGGCAAGCGCAAGGGCTCGTTCGCGATGT 1183 Query 94190 ATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCA 94249 | || ||||| |||||||| ||| | | ||| | ||||| ||||||||||||| Sbjct 1184 ACCTGGAGCCGTGGCACGCCGACATCTTCGAGTTCCTGGACCTCAAGAAGAACCACGGCA 1243 Query 94250 ACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGA 94309 |||| ||| | | || | || ||||||||||| | ||| | || || || || |||| Sbjct 1244 ACGAGCTGCACCGCGCGCGTGATCTCTTCTACGCGATGTGGATCCCCGATCTCTTCATGA 1303 Query 94310 AACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGT 94369 | ||||||||| ||| || ||||| || || || || || || || || || | Sbjct 1304 AGCGCGTCGAGGCCAACGGCGAGTGGAGCCTGTTCTGCCCGAACGAGGCGCCGGGGCTCT 1363 Query 94370 --CCGACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGC-AGGGCA 94426 |||||| | || || | || || | |||| | |||| | ||| ||||| Sbjct 1364 ACACGACGTGGGGCGA-CGAG-TTCGAGGCGCTGTACCACCAGTACG-AGCGCGAGGGCC 1420 Query 94427 AGGCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGG 94486 || | ||| || || | |||| ||| |||| | || ||| | | Sbjct 1421 GCGCGCGCAAGACGATCCGCGCGCAGCAGCTCTGGTTCGCGATCCTCGAGTCGCAGATCG 1480 Query 94487 AGACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGC 94546 |||| || ||||| ||||| ||| ||||||||| |||| |||||| ||||||||| Sbjct 1481 AGACAGGCACGCCGTACATGCTGTACAAGGACTCGTGCAACCGCAAGTCGAACCAGCAGA 1540 Query 94547 ACCTCGGGGTGATCAAGAGCTCG---AATCTGTGCACCGAGATTGTCGAGTATACTTCTC 94603 ||||||| |||| ||||| || || ||| |||| | ||||||| || || | Sbjct 1541 ACCTCGGCACGATC---CGCTCGAGCAACCTCTGCTGCGAGGTGCTCGAGTACACGTCGC 1597 Query 94604 CGGACGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATG 94663 | || ||| | || ||||| ||||| | |||||| ||||||| || ||| || Sbjct 1598 CCGATGAGGTCGCGGTGTGCAACCTCGCGTCCATCGCGCTGTCCAAGTTTGTGACCGA-- 1655 Query 94664 CCTACACGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGG 94723 | ||| | | || || | || |||| || || | |||| | | Sbjct 1656 -CGACAAG---------ACCTTTGACTTCAAGAAGCTCTACGACATCAC--CAAGG-TCG 1702 Query 94724 TCTTG---AACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGA 94780 || | |||||||||| ||| ||||||| |||| |||||| |||| ||||| ||| Sbjct 1703 TCACGCGCAACCTGAACAAGGTCATCGACATCAACTACTACCCGATCCCCGAGGCCGAGC 1762 Query 94781 ACTCAAACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGG 94840 | |||||| || || || |||||||||||||| |||||| ||||||||||| | Sbjct 1763 GCAGCAACCTGCGCCACCGCCCGATCGGCATCGGCGTGCAGGGTCTCGCGGACGCGTTCA 1822 Query 94841 TGATGATGCGTCTGC-CCTACGACTCTGTCGACG-CGGCGGGTTTGAATTTGAACATATT 94898 | | ||| | || | | | ||| | ||| | | ||| | | || |||||| || Sbjct 1823 TCCTCATG-GGCTACGCGTTCGAGAGCGACGAGGCCCGCGAG-CTCAACAAGAACATCTT 1880 Query 94899 CGAAAGCATTTATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGG 94958 ||| | | || | || |||||| | || | | | || | ||| || Sbjct 1881 CGAGACGCTGTACTTTGGCGCCATGGAGGCCTCGATGGAGCTCGCGCG---GGAGCATGG 1937 Query 94959 GCCACACGAATCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTG 95018 || ||| | | || |||||| || ||||||| || ||||||||| | || Sbjct 1938 CCCGTACGGCAGCTACGAGGGTTCGCCCGTGAGCAAGGGCATCTTCCAGTTCGACATGTG 1997 Query 95019 GGGTGTGAAGC---CCTCGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATGTTATCAA 95075 ||| || | || | |||||||| | ||||||| || || || || | Sbjct 1998 GGGCGTCACGCCGACGTCGGGTCTCTGGGACTGGGCCGCGCTCAAGGCGAGCGTCGCGCA 2057 Query 95076 ACACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGAT 95135 |||| ||| ||| ||||||| | || || ||||| ||||| || || |||||||| Sbjct 2058 GTACGGCGTGCGCAACTCGCTGCTGCTCGCGCCGATGCCGACGGCGTCGACTGCGCAGAT 2117 Query 95136 CCTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCT 95195 ||| ||||||||||||||| |||| || ||||| ||||| |||||||| | || ||||| Sbjct 2118 CCTCGGCAACAACGAGTCGATCGAGCCGTTCACGACCAACATGTACAACCGCCGCGTGCT 2177 Query 95196 CGCCGGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTCTCTGGGTGT 95255 |||||| || ||| | || | |||||| ||||| | ||| || | || || | Sbjct 2178 CGCCGGCGAGTTCACGATCGTGAACAAGTACCTCATGAAGGAGCTCATCGAGCTCGGCAT 2237 Query 95256 GTGGGGTGACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCC 95315 ||| | |||| ||||| | || | || | ||||||| || |||||| | | Sbjct 2238 CTGGACGCCCGAGGTGCGCAACCAGATCCTCCACGACCACGGCTCGGTGCAGAACGTGCG 2297 Query 95316 GCAAATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGCGT 95375 || ||||| | | | |||| | ||||||||||||||||||||| |||| | Sbjct 2298 CGTGATCCCGGACGCCGTGAAGGAGAAGTACAAGACCGTGTGGGAGATCAAGCAGAAGGC 2357 Query 95376 GATACTCGACCACGCGGCCGCCCGCGGGCCCTTCATCTGCCAGAGNNNNNNNNNNNNNNN 95435 | || ||| || || | |||||| ||| |||||||||||| Sbjct 2358 TGTGCTTGACATGGCCGCTGACCGCGGCGCCTACATCTGCCAGAGCCAGTCGCTCAACGT 2417 Query 95436 NNNNATGGCCGAGCCCAGTCGCGGAAAAATAACGTCCATGTTGTTCTACGGGTGGAGAAA 95495 || || ||||| | | | || | ||||||||| ||||||| ||||| || Sbjct 2418 GCACATCGCGGAGCCGACGATCAGCAAGCTGACGTCCATGCACTTCTACGCGTGGAAGAA 2477 Query 95496 GGGTCTCAAGACCGGTATGTATTATTTGCGAACCAGGCCAAAGGCGGACTCCATACAGTT 95555 |||||||||||| || ||||| || |||| || | || ||||| ||| | || ||||| Sbjct 2478 GGGTCTCAAGACGGGCATGTACTACCTGCGCACGCGACCGAAGGCCGACGCGATTCAGTT 2537 Query 95556 C 95556 | Sbjct 2538 C 2538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494653796519080