Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950835.1_202016-12-27] 11,223 sequences; 35,561,321 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq1222 86.0 5e-12 >seq1222 Length=6011 Score = 86.0 bits (94), Expect = 5e-12 Identities = 173/254 (68%), Gaps = 2/254 (1%) Strand=Plus/Minus Query 108347 TCGGTGTGACGGCCGGCGTCCATCGGATGTGGACCCACAAAGCCTACAAGGC-CACCGCC 108405 |||| | ||||| || | || || ||||| | ||| ||||||||| ||| ||| Sbjct 5837 TCGGCATCACGGCGGGGGCGCACCGCCTGTGGGCGCACCGCAGCTACAAGGCGCACGGCC 5778 Query 108406 CCGTTCAGGGTGTTCCTGGCGCTTTGCTTCTCGGTGGCAGGACAGAACACCATCCCGCAG 108465 ||| | | | ||||| ||| ||| |||| |||| ||| ||| ||| || Sbjct 5777 TCGTGC-GCTTCTTCCTCATGCTCTGCAACTCGATGGCGAACCAGGGCACGATCTTCCAC 5719 Query 108466 TGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACACGACGGCCGACCCACACAAC 108525 ||| | ||| ||| | || |||||||||||||| |||||| |||| ||||| ||| || Sbjct 5718 TGGTGCCGCGACCACCGCGTGCACCACAAGTACTCGGACACGTCGGCGGACCCGCACGAC 5659 Query 108526 GCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATGATGACCAAGGACCCCGAC 108585 | | | || |||| || ||||| |||| ||||| | ||| |||||||| | Sbjct 5658 TCGGGCCGCGGCTTCTTCTTTGCGCACATGGGCTGGCTGCTCGTGAAGAAGGACCCGCGC 5599 Query 108586 GTGATCTCGGCCGG 108599 ||||| |||||| Sbjct 5598 GTGATTGAGGCCGG 5585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381720580997112