Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950835.1_202016-12-27] 11,223 sequences; 35,561,321 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq2426 145 7e-30 >seq2426 Length=2661 Score = 145 bits (160), Expect = 7e-30 Identities = 297/436 (68%), Gaps = 9/436 (2%) Strand=Plus/Plus Query 122898 AAGGTCGCCGAACGTATTCAACATATGCTCATGCGCGTCGCTATAGGCGTGCACGGACGC 122957 |||||||| || ||| || || ||| | |||| ||||| | ||| | ||| | | Sbjct 769 AAGGTCGCGGAGCGTCCGCAGCAGATGATTCTGCGTGTCGCGGTCGGCATCCACAAGCAC 828 Query 122958 GACATCGAAAACGCGACCGAAACTTACGATTTGATGTCTCAAAAATTTTTCACGCACGCG 123017 ||||| || |||| ||| || ||||| | ||||| |||| || |||||||||||| Sbjct 829 GACATTGACGCCGCGCTCGAGACGTACGAGTACATGTCGCAAAGCTTCTTCACGCACGCG 888 Query 123018 AGTCCCACTTTGTTCGCCGCCGGCACGAAGTTGCCTCAGTTGTCTTCGTGTTTTTTGCTC 123077 | || || ||||| ||| |||||| | || ||| |||| ||||| || ||||| Sbjct 889 ACGCCGACGCTGTTCAACGCGGGCACGCCGCGCCCGCAGCTGTCGTCGTGCTTCCTGCTC 948 Query 123078 ACCTTGCGCGAAGACAGCATCACCGGTATCTATGAAACTTTGCGCGATTGCGCGTTGATT 123137 || || || ||| ||| || ||||| || || | | ||||||| || Sbjct 949 GCCATGAAGGACGACTCGATCGAGGGCATCTACGACACGCTCAAGCAGTGCGCGTGCATC 1008 Query 123138 TCCAAATTTGGCGGCGGCATAGGCGTGAACGTGCACGACGTAAGAGGCCGCGGAAGCCG- 123196 ||||| | | |||||||| ||||| | ||||||| || | | | || || || Sbjct 1009 TCCAAGTGGGCTGGCGGCATCGGCGTCAGCGTGCACAACATCCGCG--CGACCAACTCGT 1066 Query 123197 -CATCAGAAGCACCGACGGAATCG-CCTCCGGGCTCGAATCCATGCTGCGAGTTTACAAT 123254 |||| | |||| |||| ||| | ||| |||| |||||||||| || | ||| Sbjct 1067 ACATCCGCGGCACGAACGG-CTCGTCGAACGGCCTCGTGCCCATGCTGCGCGTCTTCAAC 1125 Query 123255 AACGCCGTGCGGCACGTCGACCAG---GGCGGCAAACGCAAAGGCGCGATGGCGATCTAT 123311 || | | ||| ||||||||||| |||||||| ||||| ||| || | ||||| || Sbjct 1126 GACACGGCGCGCTACGTCGACCAGGGCGGCGGCAAGCGCAAGGGCTCGTTCGCGATGTAC 1185 Query 123312 CTAGAACCGTGGCACG 123327 || || |||||||||| Sbjct 1186 CTGGAGCCGTGGCACG 1201 Score = 96.9 bits (106), Expect = 3e-15 Identities = 401/622 (64%), Gaps = 13/622 (2%) Strand=Plus/Plus Query 124056 CACGGCGCGTACGAAAGTTACGCGGGCAGCCCGGCGAGCCGAGGTATTTTGCAGTACGAC 124115 || ||| |||||| || |||| ||| || | |||| || || || |||| |||| Sbjct 1933 CATGGCCCGTACGGCAGCTACGAGGGTTCGCCCGTGAGCAAGGGCATCTTCCAGTTCGAC 1992 Query 124116 ATGTGGAATGCTACACCGACAAA---TTTGTGGGACTGGAGCGTTTTAAAACAACGCATA 124172 |||||| | || ||||| | | ||||||||| || | || || | Sbjct 1993 ATGTGGGGCGTCACGCCGACGTCGGGTCTCTGGGACTGGGCCGCGCTCAAGGCGAGCGTC 2052 Query 124173 TCGACGCACGGTTTGCGTAACTCGCTGTTGGTGGCGTACATGCCGACGGCAACCACTGCT 124232 || | |||| |||| ||||||||| || | ||| ||||||||||| | ||||| Sbjct 2053 GCGCAGTACGGCGTGCGCAACTCGCTGCTGCTCGCGCCGATGCCGACGGCGTCGACTGCG 2112 Query 124233 CAAATTTTAGGAAACAACGAATCCTTCGAGCCGTTCACTAACAATTTGTACGTGCGACGA 124292 || || | || |||||||| || ||||||||||||| | ||| ||||| || || Sbjct 2113 CAGATCCTCGGCAACAACGAGTCGATCGAGCCGTTCACGACCAACATGTACAACCGCCGC 2172 Query 124293 GTGTTAGCCGGCGA-TTTTCAA--GTGATAAATCATCATTTGGTGGACGACTTGGTGGCG 124349 ||| | |||||||| || | | |||| || | | || ||| | | | || Sbjct 2173 GTGCTCGCCGGCGAGTTCACGATCGTGAACAAGTACCTCATGAAGGAGCTCATCG-AGCT 2231 Query 124350 TTAAATTTGTACGATGAAAACATGCGCAACGAAATTATTGCGGCCGGTGGCAGCGTGCAG 124409 || || ||| | |||||||| | || | | | ||| |||||| Sbjct 2232 CGGCATCTGGACG--CCCGAGGTGCGCAACCAGATCCTCCACGACCACGGCTCGGTGCAG 2289 Query 124410 CGCAT-CGCTTCGATTCCGGAACACGTCAAGCAACTGTACAAAACCGTGTGGGAAATGAA 124468 | | ||| | ||| ||||| ||| ||| | |||||| ||||||||||| || || Sbjct 2290 AACGTGCGCGT-GATCCCGGACGCCGTGAAGGAGAAGTACAAGACCGTGTGGGAGATCAA 2348 Query 124469 AAATAAACGATTAATTGAAATGGCCGTCGACCGAGGCGCGTACACGGATCAAAGTCAATC 124528 | || | |||| ||||||| ||||| ||||| |||| || || || || Sbjct 2349 GCAGAAGGCTGTGCTTGACATGGCCGCTGACCGCGGCGCCTACATCTGCCAGAGCCAGTC 2408 Query 124529 TTTTAACGTGTTTGTAGCGGAACCCAC-CTACGCCCGCATGACCAGCATACACATGCACG 124587 | |||||| | ||||| || || | || || |||| ||| ||| | ||| Sbjct 2409 GCTCAACGTGCACATCGCGGAGCCGACGATCAGCAAGC-TGACGTCCATGCACTTCTACG 2467 Query 124588 CGTGGAGCAGCGGACTCAAAACGGGCATGTATTACTTAAGAACCAAACCGGCGGCCGATG 124647 |||||| | || ||||| ||||||||||| ||| | | || |||| |||||| | Sbjct 2468 CGTGGAAGAAGGGTCTCAAGACGGGCATGTACTACCTGCGCACGCGACCGAAGGCCGACG 2527 Query 124648 CCATTCAATTTACCGTCGACAA 124669 | ||||| || || |||||||| Sbjct 2528 CGATTCAGTTCACGGTCGACAA 2549 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451939789601080