Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950835.1_202016-12-27] 11,223 sequences; 35,561,321 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq2426 233 3e-56 >seq2426 Length=2661 Score = 233 bits (258), Expect = 3e-56 Identities = 529/779 (68%), Gaps = 25/779 (3%) Strand=Plus/Minus Query 203839 CTTGTCCACCGTGAACTGAATGGCGTTCACGGCA---GGCCTGCTTCTCAGATAGTACAT 203895 |||||| |||||||||||||| |||| |||| || | | | ||| |||||||| Sbjct 2550 CTTGTCGACCGTGAACTGAATCGCGT---CGGCCTTCGGTCGCGTGCGCAGGTAGTACAT 2494 Query 203896 GCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTT 203955 ||| ||||| || ||||||| |||| |||| | ||||||||| | ||| ||||| | | Sbjct 2493 GCCCGTCTTGAGACCCTTCTTCCACGCGTAGAAGTGCATGGACGTCAGCTTGCTGATCGT 2434 Query 203956 GGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTG 204014 || || || ||||| | ||| || |||||||| ||| |||| | |||||| || || | Sbjct 2433 CGGCTCCGCGATGTGCACGTTGAGCGACTGGCTCTGGCAGATGTA-GGCGCCGCGGTCAG 2375 Query 204015 CGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTC--TCT 204072 ||||||| | | | | ||||||| ||||||||||| |||||| || || || Sbjct 2374 CGGCCATGTCAAGCACAGCCTTCTGCTTGATCTCCCACACGGTCTTGTACTTCTCCTTCA 2315 Query 204073 GGTGTGTTGAGGCACATCTTCCCACGTCCTG-ATCGAGCCGTTGTCGGCCATCAGTCTCA 204131 | | || || || | ||||| ||| | |||||||| |||| | | ||| Sbjct 2314 CG-GCGTCCGGGATCACG--CGCACGTTCTGCACCGAGCCGTGGTCGTGGAGGA-TCTGG 2259 Query 204132 TC-CTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTG 204190 | | | ||| | ||| ||||| | | ||| |||||| || |||| ||| Sbjct 2258 TTGCGCACCTCGGGCGTCCAGATGCCGAGCTCGATGAGCTCCTTCATGAGGTACTTGTTC 2199 Query 204191 ATGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCG 204250 | |||| || || |||| ||||| | ||| || ||| |||| | ||||| || ||| Sbjct 2198 ACGATCGTGAACTCGCCGGCGAGCACGCGGCGGTTGTACATGTTGGTCGTGAACGGCTCG 2139 Query 204251 AACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGC 204310 | || |||||||||||||| ||||| || || ||||| ||||| || || || ||| Sbjct 2138 ATCGACTCGTTGTTGCCGAGGATCTGCGCAGTCGACGCCGTCGGCATCGGCGCGAGCAGC 2079 Query 204311 AGGGAGTTGCGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGTCCAGTC---GTGC 204367 || ||||||||||| ||||| | ||| || ||| || | || |||||| | | Sbjct 2078 AGCGAGTTGCGCACGCCGTACTGCGCGACGCTCGCCTTGAGCGCGGCCCAGTCCCAGAGA 2019 Query 204368 ATCGCACTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCTG 204427 || | || | |||||||||||||||||||| |||||||| | || || || Sbjct 2018 CCCGACGTCGGCGTGACGCCCCACATGTCGAACTGGAAGATGCCCTTGCTCACGGGCGAA 1959 Query 204428 CCCTTGTACGTCGGATAAGGCTGATCCTCTTCTGCCAGCTTGCACGAGGCGGCCATGGCG 204487 |||| ||| | || || || ||| || |||| |||||| |||||||| Sbjct 1958 CCCTCGTAGCTGCCGTACGGGCCATGCTCCCGCGCGAGCTCCATCGAGGCCTCCATGGCG 1899 Query 204488 TGATAGTACATGGTCTCAAAGATCTGAACGTTTAATCTGGC-GGCCTC--CGTTCCGTCA 204544 | |||||| ||||| ||||| | | || | || || |||||| || || || Sbjct 1898 CCAAAGTACAGCGTCTCGAAGATGTTCTTG-TTGAGCTCGCGGGCCTCGTCGCTC--TCG 1842 Query 204545 AACGCCAGACCCAGCATGGCAAACACGTCCGCCAAGCCCTGCACTCCGATTCCCAACGG 204603 ||||| |||| | | ||| ||||||| | |||||||| ||||| || | ||| Sbjct 1841 AACGCGTAGCCCATGAGGATGAACGCGTCCGCGAGACCCTGCACGCCGATGCCGATCGG 1783 Score = 141 bits (156), Expect = 1e-28 Identities = 447/675 (66%), Gaps = 22/675 (3%) Strand=Plus/Minus Query 204931 CTGCTGGTTAGACTTGCGGTTACAGGAGTCCTTGTACATCATGAACGGCATTCCGTTCTC 204990 ||||||||| ||||||||||| || ||||||||||||| |||| ||||| | || |||| Sbjct 1539 CTGCTGGTTCGACTTGCGGTTGCACGAGTCCTTGTACAGCATGTACGGCGTGCCTGTCTC 1480 Query 204991 CATCTGAGA-TCGCAGAATGTGGGTCCACAATT----CGCGAGCCTCCACTTGCTTCACG 205045 ||||| || ||| || || | ||| | | |||| | || ||||| || Sbjct 1479 GATCTGCGACTCG-AGGATCGCGAACCAGAGCTGCTGCGCGCGGATCGTCTTGCG---CG 1424 Query 205046 TACATCCCTTGAGACTCGTATTTTGTGTACAGCGCCACAAAGTCAGAACCGTACA-CGTC 205104 | |||| | | |||||| | |||||||||| | || || || || ||| Sbjct 1423 CGCGGCCCTCGCG-CTCGTACTGGTGGTACAGCGCCTCGAACTCGTCGCCCCACGTCGTG 1365 Query 205105 CATCAGCCCTGGACATTTTTTGGGACACATCAGAGACCACATCTGATCGTCTTTCACCCT 205164 | ||||| || | || || || | ||| |||| | | | | || | Sbjct 1364 TAG-AGCCCCGGCGCCTCGTTCGGGCAGAACAGGCTCCACTCGCCGTTGGCCTCGACGCG 1306 Query 205165 CTCCATAAACAGGTCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCG-T 205223 || ||| || || ||| |||||||| |||| || |||||||| || | | | | | Sbjct 1305 CTTCATGAAGAGATCGGGGATCCACATCGCGTAGAAGAGATCACGCGCGCGG-TGCAGCT 1247 Query 205224 CGTCTCCAAGGTTCTTTTTCAAGTCCAGCCAAGCCGCA-ATGTCGGCGTGCCACGGCTCT 205282 ||| || ||||||| || | |||||| || || | |||||||||||||||||||| Sbjct 1246 CGTTGCCGTGGTTCTTCTTGAGGTCCAGG-AACTCGAAGATGTCGGCGTGCCACGGCTCC 1188 Query 205283 AACCACACGGCCATTGCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATC 205342 | ||| || | | ||| | |||| || |||||||| || ||| | | | Sbjct 1187 AGGTACATCGCGAACGAGCCCTTGCGCTTGCCGCCGCCCTGGTCGACGTAGCGCGCCGTG 1128 Query 205343 GCGTTGAAAACTCGCAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATG 205402 ||||||| || |||||||| ||||| || ||||| | | |||||||||| | |||| Sbjct 1127 TCGTTGAAGACGCGCAGCATGGGCACGAGGCCGTTCGACGAGCCGTTCGTGCCGCGGATG 1068 Query 205403 GCCGAGCCTTCAGCCCTCACGTTGGAGATGGCCGCGCCAATCCCGCCAGAACACTTGGCG 205462 |||| || | | |||| | | |||| || ||||||| ||||||| | Sbjct 1067 TACGAGTTGGTCGCGCGGATGTTGTGCACGCTGACGCCGATGCCGCCAGCCCACTTGGAG 1008 Query 205463 ATCTGGGCGCACT-CTTGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCAGTGT 205521 || ||||||| |||| || ||| ||||||||| |||| || |||||| || | Sbjct 1007 ATGCACGCGCACTGCTTG-AGCGTGTCGTAGATGCCCTCGATCGAGTCGTCCTTCATGGC 949 Query 205522 CACCAGATAGCACGAAGCCAGCT--TGGCAAAGTTGGTGCCCGCGTGGAAGAGCGTGGGG 205579 | ||| ||||||| | ||||| ||| | |||||||||| ||| ||||| || Sbjct 948 GAGCAGGAAGCACGACGACAGCTGCGGGCGCGG--CGTGCCCGCGTTGAACAGCGTCGGC 891 Query 205580 CTGGCGTGGCTGAAG 205594 | ||||| ||||| Sbjct 890 GTCGCGTGCGTGAAG 876 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795043649664880