Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950835.1_202016-12-27] 11,223 sequences; 35,561,321 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq9 217 1e-51 seq1222 125 7e-24 >seq9 Length=143240 Score = 217 bits (240), Expect = 1e-51 Identities = 438/637 (69%), Gaps = 17/637 (3%) Strand=Plus/Plus Query 132887 ACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGA 132946 ||| || |||||| ||||| || || | |||||| || | || ||||| ||||| || Sbjct 120072 ACAGCAGGCAAGCGAAGTCACAGTGGAGGCCCTCATCACGCGAGATGAGCTCGTTCGAGA 120131 Query 132947 AAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCG 133006 | | | ||| |||||||| || || || |||||||| || |||| | ||| ||||| Sbjct 120132 AGCTGAGGCCAGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGCAGAACGAGCCCG 120191 Query 133007 AAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTT 133066 | ||||| | |||||| ||||| ||||| || || | |||||| | || | || | Sbjct 120192 AGAAGAAAATGCCCTCAACGGCAGCGAACGCGACAATGCGCTCAGCAAAAGCCGCG-CGG 120250 Query 133067 TGCTGG-CGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCG 133125 || | || ||| |||||||| | ||||| | | ||||| || || || ||| Sbjct 120251 CGCGAGTCGCACCACTTGAGCGCCCAGTGCGCCTTCTTCTGCACGCATGGAATGGTCTCG 120310 Query 133126 ATGGCGTTCAAC--AAACGGAGTTTCTCTTCCGA--GGAACGC-ACGTAGGTGTCGATGA 133180 ||||| || | | || | |||| |||| || | | ||| || || |||| Sbjct 120311 ATGGC-----ACGGAGAAGGTGGTTCTTCTCCGTCTGGTCCTTGATGTACGTATCAATGA 120365 Query 133181 GGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACC 133240 | ||| |||| |||||||| | |||||| |||||||| || ||||| || ||||| | Sbjct 120366 GCAGCGAGTACACCTCCGAGTGGATGTTCTCAATGGCGATCTGGAAGCCATAGAAGCAAC 120425 Query 133241 GCGCCTCGACCACCTGCACTTCTTGAGCGAAACGC-TCGACCAGATTTTCGTTGACGATG 133299 ||||||| |||||||| || ||| | ||| | || || ||||||||||| Sbjct 120426 GCGCCTCAGGAACCTGCACCTCGCTGCTGAAGTTCATCG-CGAGGTTCTCGTTGACGATA 120484 Query 133300 CCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTC 133359 |||||||| || ||||| || || || ||||||||||| || |||||||||||||| | Sbjct 120485 CCGTCGCTCGCCGCGAAGAACGCGAGGACGTGCTTGATAAAGTGGCGCTCGTTGTCCGTG 120544 Query 133360 AAGCGCTCCCAGTCGCGCGTGTCCTTGGAC-AGGTCCACCTCCTCGACGGTCCAAAACGA 133418 | | |||| || | | | | || || || || | ||||||| ||||||| || Sbjct 120545 AGGTTGCCCCAATC-CTTGAGGTCGTGCACGAGATCGATCTCCTCGGCGGTCCAGAAGCT 120603 Query 133419 CGCCTCGGCTTTTTTGTACATACTCCACATGTCCGAATATTGTATGGGAAAAATCACAAA 133478 |||||| || || |||||||| ||||| || | || || || || | ||| || Sbjct 120604 CGCCTCAGCCTTCTTGTACATCTGCCACACCTCGTTCTCCTGGATCGGGAAGAGCACGAA 120663 Query 133479 CCGGCGGGGGTTTTCGCGCAACAGCGGCTCC-GCTTG 133514 ||| ||||| ||| | | ||||||| ||||| Sbjct 120664 ACGGTTCGGGTTCTCGATGAGGAACGGCTCCGGCTTG 120700 >seq1222 Length=6011 Score = 125 bits (138), Expect = 7e-24 Identities = 156/214 (73%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 38245 TGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCG 38304 |||| || ||||| || || || || ||||| || ||||| ||||||||||| | | | Sbjct 1984 TGCAGATCTTCGTCAAGACTCTGACCGGCAAGACGATCACGCTCGACGTCGAGCCTTCGG 2043 Query 38305 ACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAAC 38364 ||||| | | | | || | || |||| ||||| |||||||| || | || || | Sbjct 2044 ACAGCATTGACAATGTCAAGCAGAAGATCCAGGACAAGGAGGGAATCCCTCCGGATCAGC 2103 Query 38365 AGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACA 38424 |||| || || | ||| || || ||||| || |||| |||||||| |||||||||| Sbjct 2104 AGCGCCTGATCTTCGCTGGTAAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACAACA 2163 Query 38425 TCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 |||| ||||| |||||||||| | ||||| || Sbjct 2164 TCCAGAAGGAGTCGACGCTGCACCTCGTGCTCCG 2197 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500102632008320