Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950835.1_202016-12-27] 11,223 sequences; 35,561,321 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq2426 185 1e-41 seq9 154 2e-32 >seq2426 Length=2661 Score = 185 bits (204), Expect = 1e-41 Identities = 1097/1740 (63%), Gaps = 35/1740 (2%) Strand=Plus/Plus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 || ||| | ||| | |||| |||||| |||| ||||| | | || ||||| | | Sbjct 784 CCGCAGCAGATGATTCTGCGTGTCGCGGTCGGCATCCACAAGCACGACATTGACGCCGCG 843 Query 111672 TTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTTC 111731 | ||||| ||||| | ||||| | | | |||| ||||| || || || || ||| Sbjct 844 CTCGAGACGTACGAGTACATGTCGCAAAGCTTCTTCACGCACGCGACGCCGACGCTGTTC 903 Query 111732 AACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGAT 111791 ||||| || || || | || || |||| || ||||| | || | ||||| || Sbjct 904 AACGCGGGCACGCCGCGCCCGCAGCTGTCGTCGTGCTTCCTGCTCGCCATGAAGGACGAC 963 Query 111792 TCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGT 111851 || ||| | ||||| |||| ||| |||| | || || ||||| ||||||||||| Sbjct 964 TCGATCGAGGGCATCTACGACACGCTCAAGCAGTGCGCGTGCATCTCCAAGTGGGCTGGC 1023 Query 111852 GGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTA--TTAGAGGTACAA 111909 || ||||| | | | || | || | || | ||| |||||| | | || || | Sbjct 1024 GGCATCGGCGTCAGCGTGCACAACATCCGCGCGACCAA--CTCGTACATCCGCGGCACGA 1081 Query 111910 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 111969 | || || | || | | || ||||| ||||| || |||| ||| |||||||| | Sbjct 1082 ACGGCTCGTCGAACGGCCTCGTGCCCATGCTGCGCGTCTTCAACGACACGGCGCGCTACG 1141 Query 111970 TAAACCAAGCTGGGCGT---CGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACG 112026 | |||| | || | |||||||| || |||| | || || ||||| ||||||| Sbjct 1142 TCGACCAGGGCGGCGGCAAGCGCAAGGGCTCGTTCGCGATGTACCTGGAGCCGTGGCACG 1201 Query 112027 CGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGC- 112085 | || ||| | |||||||| || | ||||| || | ||| | | | | || Sbjct 1202 CCGACATCTTCGAGTTCCTGGACCTCAAGAAGAACCACGGCAACGAGCTG-CACCGCGCG 1260 Query 112086 CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGT 112145 || |||||||||| ||| | ||||| || ||||||||||||||| | || |||| | Sbjct 1261 CGTGATCTCTTCTACGCGATGTGGATCCCCGATCTCTTCATGAAGCGCGTCGAGGCCAAC 1320 Query 112146 GGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGT-GGGTGA 112204 ||| | ||| || || || || || |||| || || |||| | | | ||| ||| || Sbjct 1321 GGCGAGTGGAGCCTGTTCTGCCCGAACGAGGCGCCGGGGCTCTAC-ACGACGTGGGGCGA 1379 Query 112205 GGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGGTGCC 112264 ||||| || || || ||| |||||||| || | || ||| |||| | | Sbjct 1380 CGAGTTCGAGGCGCTGTACCACCAGTACGAGCGCGAGGGCCGCGCGCGCAAGACGATCCG 1439 Query 112265 AGCTGCCG-ATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATA 112323 || || | | | ||| || || ||| |||| || | |||||| || || || || | Sbjct 1440 CGC-GCAGCAGCTCTGGTTCGCGATCCTCGAGTCGCAGATCGAGACAGGCACGCCGTACA 1498 Query 112324 TGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGAT---CA 112380 |||| ||||| ||| | || |||| ||| || || |||| | || ||| | Sbjct 1499 TGCTGTACAAGGACTCGTGCAACCGCAAGTCGAACCAGCAGAACCTCGGCACGATCCGCT 1558 Query 112381 AGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGT 112440 ||| ||||||||| || | | || | || |||||| || |||| Sbjct 1559 CGAG---CAACCTCTGCTGCGAGGTGCTCGAGTACACGTCGCCCGATGAGGTCGCGGTGT 1615 Query 112441 GTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATT 112500 | |||||||| || ||||| || |||||| |||| || ||| ||||| ||||| | Sbjct 1616 GCAACCTCGCGTCCATCGCGCTGTCCAAGTTTGTG--ACCGACGAC-AAGACCTTTGACT 1672 Query 112501 ATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATA 112560 | || ||| |||| | || || ||||| ||||| |||| || || || | Sbjct 1673 TCAAGAAGCTCTACGACATCACCAAGGTCGTCACGCGCAACCTGAACAAGGTCATCGACA 1732 Query 112561 GAAATTTTTACCC---CGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTG 112617 || | ||||| | ||| | | || | || || | ||||| || || | Sbjct 1733 TCAACTACTACCCGATCCCCGAGGCCGAGCGCA---GCAACCTGCGCCACCGCCCGATCG 1789 Query 112618 GTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCG 112677 | |||| || || ||||||||||| | ||||| || || |||| || || || Sbjct 1790 GCATCGGCGTGCAGGGTCTCGCGGACGCGTTCATCCTCATGGGCTACGCGTTCGAGAGCG 1849 Query 112678 ACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGG 112737 |||| || || |||| | || || ||||| |||| | ||| | |||| Sbjct 1850 ACGAGGCCCGCGAGCTCAACAAGAACATCTTCGAGACGCTGTACTTTGGCGCCATGGAGG 1909 Query 112738 CGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTT 112797 | |||| | || || |||| || || | | || |||||||| || | | Sbjct 1910 CCTCGATGGAGCTCGCGCGGGAGCATGGCCCGTACGGCAGCTACGAGGGTTCGCCCG-TG 1968 Query 112798 CACAAGGGGTGCTT-CAATTTGATATGTGGGAAGGTGA----GACCAAGCTTCACTACGA 112852 |||||| ||| || || || ||||||| || | ||| | || || || Sbjct 1969 AGCAAGGGCATCTTCCAGTTCGACATGTGGG-GCGTCACGCCGACGTCGGGTCTCTGGGA 2027 Query 112853 CTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGC 112912 ||||| ||| ||||||| || || | || | || | || ||| || || | || Sbjct 2028 CTGGGCCGCGCTCAAGGCGAGCGTCGCGCAGTACGGCGTGCGCAACTCGCTGCTGCTCGC 2087 Query 112913 ACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTA 112972 || ||||| || || || || || || ||| | || || || || | | || || | Sbjct 2088 GCCGATGCCGACGGCGTCGACTGCGCAGATCCTCGGCAACAACGAGTCGATCGAGCCGTT 2147 Query 112973 CACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCA 113032 |||||| ||||| || | | ||||| || ||||| ||| || |||||| | Sbjct 2148 CACGACCAACATGTACAACCGCCGCGTGCTCGCCGGCGAGTTCACGATCGTGAACAAGTA 2207 Query 113033 TCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGT 113092 ||| || | || |||| ||| | || ||||| | || || | | || | Sbjct 2208 CCTCATGAAGGAGCTCATCGAGCTCGGCATCTGGACGCCCGAGGTGCGCAACCAGATCCT 2267 Query 113093 GAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAGATGAAATTAAGAAGTTGTA 113152 | | || || | || || | | || || || | | ||| || ||| Sbjct 2268 CCACGACCACGGCTCGGTGCAGAACGTGCGCGTGATCCCGGACGCCGTGAAGGAGAAGTA 2327 Query 113153 CCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGCAGATCGTGGTCG 113212 | || || ||||| |||||| ||||| ||| ||||||||||||| || || || Sbjct 2328 CAAGACCGTGTGGGAGATCAAGCAGAAGGCTGTGCTTGACATGGCCGCTGACCGCGGCGC 2387 Query 113213 CTTCATTGATCAAAGTCAAAGTATGAATCTATTCATGGAAAGTCCAACGATGTCCAAGCT 113272 || ||| || || || | || | ||| | || ||||| |||||| Sbjct 2388 CTACATCTGCCAGAGCCAGTCGCTCAACGTGCACATCGCGGAGCCGACGATCAGCAAGCT 2447 Query 113273 CTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTATTACCTCCG 113332 | || |||||| | ||| ||||||||||||||||| ||||| ||||| ||||| || Sbjct 2448 GACGTCCATGCACTTCTACGCGTGGAAGAAGGGTCTCAAGACGGGCATGTACTACCTGCG 2507 >seq9 Length=143240 Score = 154 bits (170), Expect = 2e-32 Identities = 200/274 (73%), Gaps = 2/274 (1%) Strand=Plus/Minus Query 102048 CTCATAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCTTTGAAGCCATCCAA 102107 ||||| || | ||| || ||||| | |||||||| || || | |||||| | Sbjct 120366 CTCATTGATACGTACATCAAGGACCAGACGGAGAAGAACCACCTTCTCCGTGCCATCGAG 120307 Query 102108 ACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGATACAAAGTCG 102167 || ||||||| | || ||||| ||| | ||||| | ||||||| || | | || Sbjct 120306 ACCATTCCATGCGTGCAGAAGAAGGCGCACTGGGCGCTCAAGTGGTGCGACTCGC-GCCG 120248 Query 102168 CGTTCCTTT-GCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGG 102226 || |||| |||||||| | |||| || || |||||||| || |||||||| || Sbjct 120247 CGCGGCTTTTGCTGAGCGCATTGTCGCGTTCGCTGCCGTTGAGGGCATTTTCTTCTCGGG 120188 Query 102227 TTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTC 102286 || |||||| | || | |||||||||||||| ||||||||||| || ||| ||||||| Sbjct 120187 CTCGTTCTGCTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGCCTCAGCTTCTC 120128 Query 102287 CAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 102320 |||||||| ||||| ||||| ||||| |||||| Sbjct 120127 GAACGAGCTCATCTCGCGTGATGAGGGCCTCCAC 120094 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620655317600560