Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950835.1_202016-12-27] 11,223 sequences; 35,561,321 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq9 185 2e-41 seq2426 170 4e-37 >seq9 Length=143240 Score = 185 bits (204), Expect = 2e-41 Identities = 389/568 (68%), Gaps = 14/568 (2%) Strand=Plus/Minus Query 25480 TGGGAGATGTACAAGAAGGCTCAA---AACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 ||| ||||||||||||||||| | | || |||||||||||| ||||| ||||| Sbjct 120630 TGGCAGATGTACAAGAAGGCTGAGGCGAGCTT---CTGGACCGCCGAGGAGATCGATCTC 120574 Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTCAAGTAC 25596 | | ||| | | | ||| | || | | |||||| || ||| ||||| || Sbjct 120573 GTGCACGACCTCAAGGATTGGGGCAACCTCACGGACAACGAGCGCCACTTTATCAAGCAC 120514 Query 25597 GTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGA-GAGATT 25655 || | || ||||| || || || ||||| || |||||||| || |||| || || Sbjct 120513 GTCCTCGCGTTCTTCGCGGCGAGCGACGGTATCGTCAACGAGAACCTC-GCGATGAACTT 120455 Query 25656 CACCAGGGAAGTGCAG-TACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATCG 25714 || ||| || |||||| | | || |||| || ||||| || |||||||| ||||| | Sbjct 120454 CAGCAGCGAGGTGCAGGTTCCTG-AGGCGCGTTGCTTCTATGGCTTCCAGATCGCCATTG 120396 Query 25715 AAAATGTGCACTCTGAGGTGTATGCCAAGCTTCT-GATGACGTACATTACAGACGTCGCC 25773 | || | ||||| |||||||| | ||| | ||| |||||||| | ||| | Sbjct 120395 AGAACATCCACTCGGAGGTGTACTCGCTGCTCATTGAT-ACGTACATCAAGGACCAGACG 120337 Query 25774 GAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGCGG 25833 |||| | | || | ||||||||||| ||| || || | ||| |||||||| Sbjct 120336 GAGAAGAACCACCTTCTCCGTGCCATCGAGACCATTCCATGCGTGCAGAAGAAGGCGCAC 120277 Query 25834 TGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTT 25893 ||||| | |||||| | || | |||| | |||| ||||| | || || || Sbjct 120276 TGGGCGCTCAAGTGGTGCGACTCGCGCCGCGCGGCTTTTGCTGAGCGCATTGTCGCGTTC 120217 Query 25894 GCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTT-TGCGGCCATCTTCTGGCTCAAGCA 25952 ||||| || |||||||| || ||| || ||||| ||| ||||||||||||||||| | Sbjct 120216 GCTGCCGTTGAGGGCATTTTCTTCTCGGGCTCGTTCTGCT-CCATCTTCTGGCTCAAGAA 120158 Query 25953 GAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGTCT 26012 | || |||||| || || ||| || |||||||||||| | || ||||| || Sbjct 120157 GCGTGGTCTCATGCCTGGCCTCAGCTTCTCGAACGAGCTCATCTCGCGTGATGAGGGCCT 120098 Query 26013 CCACAGAGATTTTGCCTGCCTGCTCTAC 26040 |||| | || || || |||||||| ||| Sbjct 120097 CCACTGTGACTTCGCTTGCCTGCTGTAC 120070 >seq2426 Length=2661 Score = 170 bits (188), Expect = 4e-37 Identities = 583/893 (65%), Gaps = 27/893 (3%) Strand=Plus/Minus Query 221768 CAGAGGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCG 221827 ||||||||||| | ||| || || |||| | || || |||||||| ||| | | Sbjct 1571 CAGAGGTTGCTCGAGCGGATCGTGCCGAGGTTCTGCTGGTTCGACTTGCGGTTGCACGAG 1512 Query 221828 TCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAG 221887 |||||||| ||||| | || ||| ||||| | ||| | | | || ||| | |||| Sbjct 1511 TCCTTGTACAGCATGTACGGCGTGCCTGTCTCGATCTGCGACTCGAGGATCGCGAACCAG 1452 Query 221888 AGTTCTCTG-GCGCTCACCGTCCTCTTGACTGCAC---CCTCGGTCTTTTCATACCCGGT 221943 || | ||| |||| | |||| ||| || | ||||| || | ||| | Sbjct 1451 AGCTG-CTGCGCGCGGATCGTC---TTGCGCGCGCGGCCCTCGCGCT---CGTACTGGTG 1399 Query 221944 ATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGG--CGGGA 222001 || ||| || |||| || || ||| | || || || || | ||| | |||| Sbjct 1398 GTACAGCGCCTCGAACTCGTCGCCCCACGTCGTGTAGAGCCCCGG-CGCCTCGTTCGGG- 1341 Query 222002 CACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCAC 222061 || | ||| ||||| | |||| | | ||| | || ||||||||| || ||||||||| Sbjct 1340 CAGAACAGGCTCCACTCGCCGTTGGCCTCGACGCGCTTCATGAAGAGATCGGGGATCCAC 1281 Query 222062 AGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCC 222121 | ||| | |||||||| | | || ||| ||| ||||| ||| ||| | || ||| Sbjct 1280 ATCGCGTAGAAGAGATCACGCGCGCGGTGCAGCTCGTTGCCGTGGTTCTTCTTGAGGTCC 1221 Query 222122 AAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGC 222181 | ||||| || ||||| ||||||||||||||||| || | || | | ||| ||| Sbjct 1220 AGGAACTCGAAGATGTCGGCGTGCCACGGCTCCAGGTACATCGCGAACGAGCCCTTGCGC 1161 Query 222182 TTGTTGCCACCCTGATCCACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGTACC 222241 ||| ||| ||||| || || | | || ||||||||| ||| || | || || Sbjct 1160 TTGCCGCCGCCCTGGTCGACGTAGCGCGCCGTGTCGTTGAAGACGCGCAGCATGGGCACG 1101 Query 222242 AGTCCGTTGGATCGA-CCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGT--TA 222298 || ||||| || ||| ||||| ||||| ||||||| | || | | || | Sbjct 1100 AGGCCGTTCGA-CGAGCCGTTCGTGCCGCGGATGTACGAGTTGGTCGCGCGGATGTTGTG 1042 Query 222299 CTGGCAGACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTG 222358 | || ||| |||||| || || || || ||||| ||||| |||||| ||| Sbjct 1041 CACGCTGAC--GCCGATGCCGCCAGCCCACTTGGAGATGCACGCGCACTGCTTGAGCGTG 984 Query 222359 TCCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGA 222418 || ||||||||| || ||||| ||||| | | ||||| || || ||||||| ||| Sbjct 983 TCGTAGATGCCCTCGATCGAGTCGTCCTTCATGGCGAGCAGGAAGCACGACGACAGCTGC 924 Query 222419 GATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGAC 222478 | | | | ||||| |||||||| || | ||||| || ||| ||| ||| Sbjct 923 GGGCGCGGCGTGCCCGCGTTGAACAGCGTCGGCGTCGCGTGCGTGAAGAAGCTTTGCGAC 864 Query 222479 ATCAGATCGTACGTCTCTACGACTCTGGCGATGTTGTCCCCGTGAATCTGCATGGCGCAT 222538 || ||||||||||| | | | | |||| || | ||| || | ||| Sbjct 863 ATGTACTCGTACGTCTCGAGCGCGGCGTCAATGTCGTGCTTGTGGATGCCGACCGCGACA 804 Query 222539 CTCATGTACATGTACTGGGGCCTCTCCACAGGACCCTTGGAGC---TGGAGAGCAGGTAC 222595 | || ||| | ||| || | |||| | || ||||| || | ||| |||||| Sbjct 803 CGCAGAATCATCTGCTGCGGACGCTCCGC--GA-CCTTGCCGCCGACGCGGAGGAGGTAC 747 Query 222596 GATTTTTCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTG 222648 || || || || |||||||| |||||||||| | |||||||| | | |||| Sbjct 746 GACTTCTCGAGCGTCTTGAAGCCAAAGTAGTCGTACTCAAAGTCGCGGTCGTG 694 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928714494685120