Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950835.1_202016-12-27] 11,223 sequences; 35,561,321 total letters Query= NC_021311.1 Length=76479 Score E Sequences producing significant alignments: (Bits) Value seq341 187 1e-42 >seq341 Length=18574 Score = 187 bits (206), Expect = 1e-42 Identities = 362/528 (69%), Gaps = 21/528 (4%) Strand=Plus/Minus Query 66807 GCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGACCCTGAG 66866 |||||| || || ||| | ||| | ||||||||| |||||| || | ||| | | Sbjct 5327 GCGCAGCAGCAAGGCGGCGTCTGCGCGTTCATCGACGCCGAGCACGCCATCGACGCGCAC 5268 Query 66867 TACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCGGACACTGGC 66926 ||||||||| |||||| || || | ||| | ||| | ||||| || | || Sbjct 5267 TACGCCAAGCAGCTCGGCGTCAACATTGACGAGCTCTACATCTCGCAGCCCGATTCGGGG 5208 Query 66927 GAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCCA--TCGTCG 66984 |||||||| |||||||||| ||| || || |||||||| | ||| | |||||| Sbjct 5207 GAGCAGGCGCTGGAGATCGCCGACACGCTTGTGCGGTCTGGCG--CCGTCGACGTCGTCG 5150 Query 66985 TCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGACA 67044 |||||||| |||||| || || ||||||||||| ||||| || ||||| || || ||| Sbjct 5149 TCGTTGACAGTGTGGCCGCGCTCGTGCCGCGCGCTGAGCTTGAGGGCGAGATGGGCGACC 5090 Query 67045 GTCACGTCGGCCTGCACGCGCGCCTCATGTCACAGGCCATGCGCAAGCTCACCGGCACCA 67104 || ||| ||||| ||||| |||||| ||||| ||||||||||||| || | Sbjct 5089 AGCAGATCGCGCTGCAGGCGCGGCTCATGAGCCAGGCGCTGCGCAAGCTCACGGG----A 5034 Query 67105 TCTC-CAGCA---CCAA---CACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATC 67157 || | |||| |||| || ||| | ||| | |||||| | ||| |||| | Sbjct 5033 TCGCTGAGCAAGTCCAACTGCATGCTCA---TCTTTCTGAACCAGATCCGCCAGAAAGTG 4977 Query 67158 GGCAACGTGGGCTACGGCCCGAATGAGACCACCACGGGCGGCAAGGCTTTGAGGTTCTAC 67217 |||| | | || || || ||| ||| ||||||||| ||| || | | |||| Sbjct 4976 GGCATCCT---CTTTGGGTCGCCCGAGGTCACGTCGGGCGGCACGGCGCTGCGCTACTAC 4920 Query 67218 GCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGTC 67277 || || || || | || | || |||| ||| | ||||||||||| ||| ||| Sbjct 4919 GCGTCGGTGCGGCTCGACATTCGGCGCAAGGCCGCGATCAAGGAAGGCGACAAGGTCGTC 4860 Query 67278 GGCAACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCG 67325 |||||| | | || ||||||| |||||||||||| || ||||| Sbjct 4859 GGCAACGAGATCGTCGTCAAGGTCGCCAAGAACAAGCTCGCGTCGCCG 4812 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 244574542441320