Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950835.1_202016-12-27] 11,223 sequences; 35,561,321 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq2426 214 2e-50 >seq2426 Length=2661 Score = 214 bits (236), Expect = 2e-50 Identities = 971/1508 (64%), Gaps = 66/1508 (4%) Strand=Plus/Minus Query 138514 AATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAACGATTCG 138573 || || ||||| | || || || ||| |||||| | ||||| ||||| | ||| ||| Sbjct 2189 AACTCGCCGGCGAGCACGCGGCGGTTGTACATGTTGGTCGTGAACGGCTCGATCGACTCG 2130 Query 138574 TTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGAGAATTC 138633 ||||| || || ||||| || || | ||| |||||||| ||| | || || || || Sbjct 2129 TTGTTGCCGAGGATCTGCGCAGTCGACGCCGTCGGCATCGGCGCGAGCAGCAGCGAGTTG 2070 Query 138634 CGTAAACCGTGAAGCTTGATTCGTTCCTTGAGCGACGACCAGTCCCACAAATCGC---TA 138690 || | |||| || || | ||||||||| | ||||||||| | | | | Sbjct 2069 CGCACGCCGTACTGCGCGACGCTCGCCTTGAGCGCGGCCCAGTCCCAGAGACCCGACGTC 2010 Query 138691 GGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACTGCCTTCGTAC 138750 || | | |||||| ||| |||| || || ||| || |||| || ||||| Sbjct 2009 GGCGTGACGCCCCACATGTCGAACTGGAAGATGCCCTTGCTCACGGGCGAACCCTCGTAG 1950 Query 138751 GAATCGTATACACCAAACTCTTGCGCCAACTCGTTGCTCGCCTCGAGCGCACCATAGTAA 138810 |||| ||| ||| |||| | ||| | ||||| | || ||| |||| Sbjct 1949 CTGCCGTACGGGCCATGCTCCCGCGCGAGCTCCATCGAGGCCTCCATGGCGCCAAAGTAC 1890 Query 138811 ATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCGTACGGCATGCGG 138870 | || ||| || | || |||||| ||||||||| |||||||| ||| || Sbjct 1889 AGCGTCTCGAAGATGTTCTTGTTGAGCTCGCGGGCCTCGTCGCTCTCGAACGCGTAGCCC 1830 Query 138871 AGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCGATGGCGCAGA 138930 | | |||||||||| || || || |||||||| | |||| ||||| |||||||| Sbjct 1829 ATGAGGATGAACGCGTCCGCGAGACCCTGCACGCCGATGCCGATCGGGCGGTGGCGCAGG 1770 Query 138931 TT--TGACGCTTTTGCGGCTTCG---ATAGGATAATAGTTTACATCGATGATTTTGTTTA 138985 || || |||| |||| ||| || || || ||||| | ||||||| ||||| | Sbjct 1769 TTGCTG-CGCT----CGGCCTCGGGGATCGGGTAGTAGTTGATGTCGATGACCTTGTTCA 1715 Query 138986 AATTTCGCACGACCACCTTAGTCGTATGCTTTAATCGT-TCAAAATCGTATGTGCCCCCG 139044 || ||| ||| ||||| || | | | | | | | | || || | || Sbjct 1714 GGTTGCGCGTGACGACCTTGGTGATGT-CGTAGAGCTTCTTGAAGTCAAAGGTC------ 1662 Query 139045 TTGTCGTCGACGACGTCGACAAATTTGTTGACACAA--ATCGAGGCTATGTTGCACACCG 139102 ||||||||| ||| ||||| ||| |||| || || || | ||||||||||| Sbjct 1661 TTGTCGTCG-----GTC-ACAAACTTG--GACAGCGCGATGGACGCGAGGTTGCACACCG 1610 Query 139103 CCACTTCGTCGGG-GTCGCTGTATTCGACAATTTCGGCACACAAATTACTACACTTGATC 139161 | || || ||||| | || |||| |||| | ||| || | || || | |||| Sbjct 1609 CGACCTCATCGGGCGACG-TGTACTCGAGCACCTCGCAGCAGAGGTTGCTCGAGCGGATC 1551 Query 139162 GTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGGT 139221 || || | || || || || || ||||| || | || ||||| ||||| ||||| Sbjct 1550 GTGCCGAGGTTCTGCTGGTTCGACTTGCGGTTGCACGAGTCCTTGTACAGCATGTACGGC 1491 Query 139222 GTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAACAAGTCC--CTA-GCTTGTAT- 139277 ||||| || || | || | ||| | || |||| || | || || | || Sbjct 1490 GTGCCTGTCTCGATCTGCGACTCGAGGATCGC---GAACCAGAGCTGCTGCGCGCGGATC 1434 Query 139278 ---TTGACGCACGTAAAGTTCGTCGCGCTCGTACTTTTCGTAGAGTTCGTCGAA-TCGTT 139333 ||| ||| || | | ||||||||||||| | ||| || | ||||| |||| Sbjct 1433 GTCTTG-CGCGCGC---GGCCCTCGCGCTCGTACTGGTGGTACAGCGCCTCGAACTCGT- 1379 Query 139334 CACCGTAGGCGTCAGAAAGATCGC--GACACTTGTCAGGACACATGAGCGACCATACGCC 139391 | || | |||| ||| | | | || || || || | || ||| |||| Sbjct 1378 CGCCCCA--CGTCGTGTAGAGCCCCGGCGCCTCGTTCGGGCAGAACAGGCTCCACTCGCC 1321 Query 139392 GTTCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAACAGCAAATCGCG 139451 ||| |||| ||||||| ||||||| ||||| || ||||||| ||| | | | ||| || Sbjct 1320 GTTGGCCTCGACGCGCTTCATGAAGAGATCGGGGATCCACATCGCGTAGAAGAGATCACG 1261 Query 139452 CGCCTTCTT-ATCTTCCGAACCCATGTTACGT-TTCATGTTAAGGAAATCAAAAACGTCA 139509 ||| | | || || || || | | | || | || ||||| || || | ||| Sbjct 1260 CGCGCGGTGCAGCT--CGTTGCCGTGGTTCTTCTTGAGGTCCAGGAACTCGAAGATGTCG 1203 Query 139510 GCGTGCCATGGTTCCAGATAGATGGCCATTGCGCCTTTCCGTTTGCCACCT---TGATCG 139566 |||||||| || ||||| || || || | | ||| || || ||||| || || ||| Sbjct 1202 GCGTGCCACGGCTCCAGGTACATCGCGAACGAGCCCTTGCGCTTGCCGCCGCCCTGGTCG 1143 Query 139567 ACGTGTCGTACAGCATTATTGAATACGCGCAACATCGGCTCCAGACCGCTCGCTGTTCCG 139626 |||| || | | | ||||| ||||||| ||| ||| | || ||| ||| | ||| Sbjct 1142 ACGTAGCGCGCCGTGTCGTTGAAGACGCGCAGCATGGGCACGAGGCCGTTCGACGAGCCG 1083 Query 139627 TTGGTGCTACGGATGGGACTGTTGCGAGCTCGGACGTCATGTACATTGATGCCGATTCCG 139686 || |||| |||||| |||| || |||| || || || ||| |||||| ||| Sbjct 1082 TTCGTGCCGCGGATGTACGAGTTGGTCGCGCGGATGTTGTGCACGCTGACGCCGATGCCG 1023 Query 139687 CCGCCAAATTTGGATATTAAAACGCAATCGCGTAAT-GTCTCGTATATACCTCTTATGCT 139745 || | | ||||| || | |||| | || | | || ||||| || || || Sbjct 1022 CCAGCCCACTTGGAGATGCACGCGCACT-GCTTGAGCGTGTCGTAGATGCCCTCGATCGA 964 Query 139746 GTCGTCCTGCATCGTGACCAGAAAGCATGACGAAAGTTGCGGTAGTTTCGTGCCGGCTGC 139805 |||||||| ||| | || ||| ||||| ||||| || ||||| | |||||| || Sbjct 963 GTCGTCCTTCATGGCGAGCAGGAAGCACGACGACAGCTGCGGGCGCGGCGTGCCCGCGTT 904 Query 139806 AAACAGAGTAGGACTCGCGTGCGTGAACATTTGTTTCGACATCAATTCGTACGTTTCGAT 139865 ||||| || || ||||||||||||| | || |||||| | |||||||| |||| Sbjct 903 GAACAGCGTCGGCGTCGCGTGCGTGAAGAAGCTTTGCGACATGTACTCGTACGTCTCGAG 844 Query 139866 GGCGCTCACAATATC--CCTTCCGTGGATACCGACAGAGACTCGCATCAGCATATGTTGG 139923 ||| |||| || ||| |||||| ||||| | ||| |||| | ||| || || Sbjct 843 CGCGGCGTCAATGTCGTGCTT--GTGGATGCCGACCGCGACACGCAGAATCATCTGCTGC 786 Query 139924 ATCCGTTCGGCCACCGCGCCCTCGAtttttttCAGATAACCGTTCTCTAGGGTCTTGTAG 139983 || || || ||| ||| ||| || || ||||| || |||||| || Sbjct 785 GGACGCTCCGCGACCTTGCCGCCGACGCGGAGGAGGTACGACTTCTCGAGCGTCTTGAAG 726 Query 139984 CCAAAGTA 139991 |||||||| Sbjct 725 CCAAAGTA 718 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449834484990440