Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950835.1_202016-12-27] 11,223 sequences; 35,561,321 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq2426 634 6e-177 seq9 150 2e-31 seq1222 132 5e-26 >seq2426 Length=2661 Score = 634 bits (702), Expect = 6e-177 Identities = 1265/1848 (68%), Gaps = 57/1848 (3%) Strand=Plus/Minus Query 147945 GGTTGAGTGCGCAGATAGTACATGCCCGTCTTGAGGCCCATGCGCCATGCGTAGTCGTGC 148004 ||| | |||||||| |||||||||||||||||||| ||| | ||| |||||| |||| Sbjct 2516 GGTCGCGTGCGCAGGTAGTACATGCCCGTCTTGAGACCCTTCTTCCACGCGTAGAAGTGC 2457 Query 148005 ACCGACGACATGAGCGTGTACGTCGGGTGCGGCACAAACAGATTAAACGACTGGCTCTGG 148064 | |||| || || |||||| | || | || || | ||||||||||||| Sbjct 2456 ATGGACGTCAGCTTGCTGATCGTCGGCTCCGCGATGTGCACGTTGAGCGACTGGCTCTGG 2397 Query 148065 TCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGAGTCGCTTTATCTTCATCTCCCAG 148124 ||| | ||||| |||||||||||||| |||| | ||| ||| |||||||| Sbjct 2396 CAGATGTAGGCGCCGCGGTCAGCGGCCATGTCAAGCACAGCCTTCTGCTTGATCTCCCAC 2337 Query 148125 GCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATGCGCTGCACCGAGCCG 148184 | ||||||||| | ||| | || || || || | | ||||||||||||| Sbjct 2336 ACGGTCTTGTACTTCTCCTTCACGGCGTCCGGGATCACGCGCACGTTCTGCACCGAGCCG 2277 Query 148185 CGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTGAGCTCGATCAGGTCA 148244 ||| | ||||| ||||||| ||| ||| | | | ||||||||| || || Sbjct 2276 TGGTCGTGGAGGATCTGGTTGCGCACCTCGGGCGTCCAGATGCCGAGCTCGATGAGCTCC 2217 Query 148245 TCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCAGATACACG 148304 | || || |||| ||||| | | |||||||||||||||||||| || |||| | Sbjct 2216 TTCATGAGGTACTTGTTCACGATCGTGAACTCGCCGGCGAGCACGCGGCGGTTGTACATG 2157 Query 148305 TTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTTGCCGTG 148364 ||| |||| ||||| || | ||||||||||||||| | |||||||| |||| ||||| Sbjct 2156 TTGGTCGTGAACGGCTCGATCGACTCGTTGTTGCCGAGGATCTGCGCAGTCGACGCCGTC 2097 Query 148365 GGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCGCTTCAGA 148424 ||||| ||| | ||||||||||||||||| ||| | | | ||| || Sbjct 2096 GGCATCGGCGCGAGCAGCAGCGAGTTGCGCACGCCGTACTGCGCGACGCTCGCCTTGAGC 2037 Query 148425 GCCGCCCAGTCCCAGAG---CGGCGACGGTGTCACGTTCCACATGTCGTACTGCAGAATG 148481 || |||||||||||||| || || ||| || ||| |||||||||| |||| | ||| Sbjct 2036 GCGGCCCAGTCCCAGAGACCCGACGTCGGCGTGACGCCCCACATGTCGAACTGGAAGATG 1977 Query 148482 CCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCAGTTCG 148541 || ||| |||| |||||||| || |||||| || ||| || ||| || || Sbjct 1976 CCCTTGCTCACGGGCGAACCCTCGTAGCTGCCGTACGGGCCATGCTCCCGCGCGAGCTC- 1918 Query 148542 CAGCTCG-CCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCAGCGC 148600 || | | |||| | ||||| |||| | ||||||| || | | |||||||| ||| Sbjct 1917 CATCGAGGCCTCCATGGCGCCAAAGTACAGCGTCTCGAAGATGTTCTTGTTGAGCT-CGC 1859 Query 148601 CGCCGAC-TCGCTTTCGTACGGCATA-CGCAGCCGCACAAACGCGTCGGCAAGGCCCTGT 148658 | | | ||||| ||| ||| | || | || | | |||||||| || || ||||| Sbjct 1858 GGGCCTCGTCGCTCTCGAACG-CGTAGCCCATGAGGATGAACGCGTCCGCGAGACCCTGC 1800 Query 148659 ACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCGAG---CGGA 148715 ||||| | ||| || || ||||| | |||| | ||| || |||| | ||| Sbjct 1799 ACGCCGATGCCGATCGGGCGGTGGCGCAGGTTGCTG---CGCTCGGCCTCGGGGATCGGG 1743 Query 148716 TAGTGGTTGCGGTCGATGATCTTGTCAAGATTGCGCACCACCACCTTTGTAATTCTGCGC 148775 |||| |||| |||||||| ||||| || |||||| || ||||| || || | Sbjct 1742 TAGTAGTTGATGTCGATGACCTTGTTCAGGTTGCGCGTGACGACCTTGGTGATGTCGTAG 1683 Query 148776 AGC------AATTCAAAATCGTACTTGTCATCTACGATGCATCGGTTCACGGCGATAGAG 148829 ||| || ||||| || |||||| || | | | || ||||| || Sbjct 1682 AGCTTCTTGAAGTCAAAG--GT-CTTGTCGTCGGTCACAAACTTGGACAGCGCGATGGAC 1626 Query 148830 GCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCACAGA 148889 || || |||||||| || |||||| || | ||||||| | | |||| ||| || Sbjct 1625 GCGAGGTTGCACACCGCGACCTCATCGGGCGACGTGTACTCGAGCACCTCGCAGCAGAGG 1566 Query 148890 TTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGTCCTTG 148949 ||||| | |||| ||| | ||||| || || ||||| |||||||| ||||||| Sbjct 1565 TTGCTCGAGCGGATCGTGCCGAGGTTCTGCTGGTTCGACTTGCGGTTGCACGAGTCCTTG 1506 Query 148950 TACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTAT---GAACCGATGCAGG 149006 |||||||||||||| ||| || || | ||||| || | || ||||| || | Sbjct 1505 TACAGCATGTACGGCGTGCCTGTCTCGATCTGCGACTCGAGGATCGCGAACCAGAGCTG- 1447 Query 149007 TCCTGCGCGCGCA-CTTGCTGCTCGTAGCGACCCTCCTGCTCGTATAAAGTATACAGCCG 149065 ||||||||| | | | ||| || ||| ||||| ||||||| |||||| Sbjct 1446 --CTGCGCGCGGATCGTCTTGCGCGC-GCGGCCCTCGCGCTCGTACTGGTGGTACAGCGC 1390 Query 149066 CTCGAACGCCTCGCCGTAGCAATCGTCGAGA---CCGGGGCACTTGTGCGGGCACATGAG 149122 ||||||| | ||||| | |||| ||| |||| || || || |||||| | || Sbjct 1389 CTCGAACTCGTCGCCCCACG--TCGTGTAGAGCCCCGGCGC-CTCGTTCGGGCAGAACAG 1333 Query 149123 CGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGCGCGTA 149182 |||| |||||| || | ||||||||||| || |||||||| | ||| | |||||| Sbjct 1332 GCTCCACTCGCCGTTGGCCTCGACGCGCTTCATGAAGAGATCGGGGATCCACATCGCGTA 1273 Query 149183 CATGAGGTC--GCGCGCCTTGCAG-TCTTCGGCGCC---CATGTTGCGGCGCAGGTTGAG 149236 | ||| || |||||| ||||| || | | || | | ||| || |||| Sbjct 1272 GAAGAGATCACGCGCGCGGTGCAGCTCGTTGCCGTGGTTCTTCTTGAGGTCCAGGA---- 1217 Query 149237 CACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGCTT 149296 || | ||| ||||| |||||||||||||| | ||||| ||||| || |||||||||||| Sbjct 1216 -ACTC-GAAGATGTCGGCGTGCCACGGCTCCAGGTACATCGCGAACGAGCCCTTGCGCTT 1159 Query 149297 GCCGCC---CTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCAAT 149353 |||||| ||||||||||| |||| || ||| ||| || || || | ||| || | | Sbjct 1158 GCCGCCGCCCTGGTCGACGTAGCGCGCCGTGTCGTTGAAGACGCGCAGCATGGGCACGAG 1099 Query 149354 GCCACTGGCAGTGCCGTTAGTAGAGCTAATG--CGACTGCCGCGCGCTCGCACTTTGTGC 149411 ||| | | | |||||| || || ||| ||| | ||||| | | |||||| Sbjct 1098 GCCGTTCGACGAGCCGTTCGTGCCGCGGATGTACGAGTTGGTCGCGC--GGATGTTGTGC 1041 Query 149412 ACGTTGACGCCGATGCCGCCGCCGTACTTTGAGATGGCCGCGCAGTCGCCGAGCGTCGAG 149471 ||| |||||||||||||||| | |||| |||||| |||||| | |||||| | Sbjct 1040 ACGCTGACGCCGATGCCGCCAGCCCACTTGGAGATGCACGCGCACTGCTTGAGCGTGTCG 981 Query 149472 TAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTGCGGA 149531 |||||||||||||| |||| |||||||| ||||| |||||||| ||| ||||| Sbjct 980 TAGATGCCCTCGATCGAGTCGTCCTTCATGGCGAGCAGGAAGCACGACGACAGCTGCGGG 921 Query 149532 AAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCTGGCTCATC 149591 ||||||| || ||||| || || | ||||| || || | | || ||| Sbjct 920 CGCGGCGTGCCCGCGTTGAACAGCGTCGGCGTCGCGTGCGTGAAGAAGCTTTGCGACATG 861 Query 149592 ATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTATGGCGACGCGC 149651 |||||||| ||||||| || ||| ||||| | |||||||| | ||||| ||| Sbjct 860 TACTCGTACGTCTCGAGCGCGGCGTCAATGTCGTGCTTGTGGATGCCGACCGCGACACGC 801 Query 149652 ATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAGTAGCCGTTT 149711 | | ||| |||||||| |||||||| || ||| || | ||| | ||| || Sbjct 800 AGAATCATCTGCTGCGGACGCTCCGCGACCTTGCCGCCGACGCGGAGGAGGTACGACTTC 741 Query 149712 TCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGG 149759 || || |||||| |||||||||| | ||| |||||||||||| ||||| Sbjct 740 TCGAGCGTCTTGAAGCCAAAGTAGTCGTACTCAAAGTCGCGGTCGTGG 693 >seq9 Length=143240 Score = 150 bits (166), Expect = 2e-31 Identities = 502/767 (65%), Gaps = 17/767 (2%) Strand=Plus/Plus Query 120354 GTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTTCAT 120413 ||||||||| ||||| ||||| || ||||| || ||||||| | ||| || ||| ||| Sbjct 119794 GTACTCGCCAACGCGCTTCTCGAAGAAGTTGGTCTTGCCCTGGAGCGAGATCATGTCCAT 119853 Query 120414 AAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACG-AGCAGTC 120472 | || |||||||| | || | || | ||| |||| | | | || || | Sbjct 119854 CCAGTCAAACGGGTTCGAGACCTTGTAA-ATCTTGGCGACACCAAGCGCATGGAGGAGGC 119912 Query 120473 GGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGCCA 120532 | || || ||||| ||||||| |||||| | || ||||||||| | || | | | Sbjct 119913 GATCGGCGCAGAACTCGATGTACTGGCACATAAGCGACGAGTTCATGCCGATCAGCTCGA 119972 Query 120533 CCGGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATGGCGA 120592 |||| | || | || |||||||||||||| | || || || | || | Sbjct 119973 CCGGAAGCGAGTCCTGGACGAACTCCTTCTCAATCGCGACGGCATCGCGAATGATCTCAT 120032 Query 120593 GCATA-GTGTGGCCGGGCATCTTGTGTTCGATGCGCGTTCGGTAGTACAGGCACGCAAAG 120651 | || | | ||||| | ||||| | | || | ||| |||||| || ||| Sbjct 120033 GGATGCGCGACTCCGGG-AGCTTGTTGACAA---GCTTGGAGTACAGCAGGCAAGCGAAG 120088 Query 120652 TCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCGGGCATG 120711 || ||| |||||||| || ||||| || |||||||| || | ||||| |||||| Sbjct 120089 TCACAGTGGAGGCCCTCATCACGCGAGATGAGCTCGTTCGAGAAGCTGAGGCCAGGCATG 120148 Query 120712 ATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACACGCCCTCC 120771 | || | |||||| |||| |||| | || |||||| ||||| | |||||| Sbjct 120149 AGACCACGCTTCTTGAGCCAGAAGATGGAGCAGAACGAGCCCGAGAAGAAAATGCCCTCA 120208 Query 120772 ACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGC-CGTCTTGCTGTCGATCCACTT 120830 ||| || || ||||| |||||||| || || | ||| || | | |||| |||||| Sbjct 120209 ACGGCAGCGAACGCGACAATGCGCTCAGCAAAAGCCGCGCGGCGCGA-GTCGCACCACTT 120267 Query 120831 CATGGCCCACTCGGCCTTTTTGCGCACGCACGGCATCCGCTCGAACGCGTTCAGCAGCAT 120890 | ||||| | ||||| || ||||||| || || ||||| || || || Sbjct 120268 GAGCGCCCAGTGCGCCTTCTTCTGCACGCATGGAATGGTCTCGATGGCACGGAGAAGGTG 120327 Query 120891 GTCGCGCTCGCCCTCCTCCGCAATCAGCTGATGGATGAGCAGATTGTACATTTCCGTGTG 120950 || ||| || ||| || | || |||||||| ||||| |||| ||| Sbjct 120328 GTTCTTCTCCGTCTGGTCCTTGATGTACGTATCAATGAGCAGCGAGTACACCTCCGAGTG 120387 Query 120951 CACGCACTCGATCAGCACTTGCTGGTTG---TAAAAGTACTGCGCCTCCAGCTCGGGCAC 121007 | | ||| || || | |||| | || ||| | ||||||| | | |||| Sbjct 120388 GATGTTCTCAATG-GCGAT--CTGGAAGCCATAGAAGCAACGCGCCTCAGGAACCTGCAC 120444 Query 121008 CGCCC-GCTGCATGTACTCGATAAGGTTAATATTCACGATACTGTCGGCGGCGGCGAAGA 121066 | | | |||| | | ||| | |||| || ||||||| |||| || ||||||| Sbjct 120445 CTCGCTGCTGAAGTTCATCGCGA-GGTTCTCGTTGACGATACCGTCGCTCGCCGCGAAGA 120503 Query 121067 ACGCCAGCACGTGCTTGATAAAGTGTCGCTCGTCGTCCGTGAGCTTG 121113 |||| || ||||||||||||||||| ||||||| ||||||||| ||| Sbjct 120504 ACGCGAGGACGTGCTTGATAAAGTGGCGCTCGTTGTCCGTGAGGTTG 120550 >seq1222 Length=6011 Score = 132 bits (146), Expect = 5e-26 Identities = 147/196 (75%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || ||||| ||||| || ||||| || | ||| ||||||||||||||| || Sbjct 2179 GTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTACCA 2120 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| | || || |||||||| || |||||||| || |||||||| |||||| |||||| Sbjct 2119 GCGAAGATCAGGCGCTGCTGATCCGGAGGGATTCCCTCCTTGTCCTGGATCTTCTGCTTG 2060 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | |||| |||| | ||||| ||||||| |||| || |||||||||||||| Sbjct 2059 ACATTGTCAATGCTGTCCGAAGGCTCGACGTCGAGCGTGATCGTCTTGCCGGTCAGAGTC 2000 Query 133644 TTTACGAAAATCTGCA 133659 || ||||| ||||||| Sbjct 1999 TTGACGAAGATCTGCA 1984 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483352982104520