Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950835.1_202016-12-27] 11,223 sequences; 35,561,321 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq2426 297 2e-75 >seq2426 Length=2661 Score = 297 bits (328), Expect = 2e-75 Identities = 1204/1848 (65%), Gaps = 67/1848 (4%) Strand=Plus/Minus Query 146584 GTGCGCAAATAATACATGCCCGTTTTGAGGCCACATCG-CCACGAGTGATTGTGAATCGA 146642 ||||||| || ||||||||||| ||||| || | || ||||| || ||| || || Sbjct 2510 GTGCGCAGGTAGTACATGCCCGTCTTGAGACC-CTTCTTCCACGCGTAGAAGTGCATGGA 2452 Query 146643 AGTCATGATGGCGTACGTCGGCTCCGCCACGAAAAGATTAAACGATTGGCTTTGATCTAT 146702 |||| || | |||||||||||| | | | || | ||| ||||| || || Sbjct 2451 CGTCAGCTTGCTGATCGTCGGCTCCGCGATGTGCACGTTGAGCGACTGGCTCTGGCAGAT 2392 Query 146703 GAAAGCGTTGCGGTCGGCCGCCATCTCAATCAT-GCGTTTTGTCTTCATTTCCCAAGCGG 146761 | | ||| |||||| || ||||| |||| || || || || ||| || ||||| ||| Sbjct 2391 GTAGGCGCCGCGGTCAGCGGCCATGTCAAGCACAGCCTTCTG-CTTGATCTCCCACACGG 2333 Query 146762 TTTTGTACAGCCCCTTAACGCTATCTGGAATACCTTCAATGTTTTGAATAGAGCCCTTGT 146821 | |||||| | |||| ||| || || || | | ||| || | ||||| | || Sbjct 2332 TCTTGTACTTCTCCTTCACGGCGTCCGGGATCACGCGCACGTTCTGCACCGAGCCGTGGT 2273 Query 146822 GCGCAAAAATAGTGTTTCGTATTTCGGGCGTGTAAAGGTTTAGTTTAATGAGGTCATCAA 146881 | || ||| || | |||||||| | | | || | ||||| || | | Sbjct 2272 CGTGGAGGATCTGGTTGCGCACCTCGGGCGTCCAGATGCCGAGCTCGATGAGCTCCTTCA 2213 Query 146882 TTAAATACTGATTGACCA-CTTGAAACTCGCCCGCCAGCACACGTCTGAGATACACATTG 146940 | | |||| || || | | |||| |||||| || ||||| || | | |||| ||| Sbjct 2212 TGAGGTACTTGTTCACGATCGTGAA-CTCGCCGGCGAGCACGCGGCGGTTGTACATGTTG 2154 Query 146941 CTAGTGAAAGGCTCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGC 147000 | ||||| ||||| | ||||| || ||||| | || || || || | || || ||| Sbjct 2153 GTCGTGAACGGCTCGATCGACTCGTTGTTGCCGAGGATCTGCGCAGTCGACGCCGTCGGC 2094 Query 147001 ATGTACGCCACCAACAATGAATTTCGCAGACCGTAC-GCACGGATGTTGTCCTTCAAAGT 147059 || ||| | || || || || |||| |||||| || || | | | |||| | | Sbjct 2093 ATCGGCGCGAGCAGCAGCGAGTTGCGCACGCCGTACTGCGCG-ACGCTCGCCTTGAGCGC 2035 Query 147060 TTGCCAGTCCCACAT---CGACGAGGGCGTCACGTTCCACATGTCGTACTGGA----GCA 147112 ||||||||| | ||||| ||||| ||| |||||||||| |||||| || Sbjct 2034 GGCCCAGTCCCAGAGACCCGACGTCGGCGTGACGCCCCACATGTCGAACTGGAAGATGCC 1975 Query 147113 CTC-CTCGACTGGCGGGACTGCC-AGCGAACGTAGTGTA---GCTTCCGTCGCGCTGCGC 147167 || ||| || |||| | | ||| |||| | ||| ||| |||| || | Sbjct 1974 CTTGCTC-ACGGGCGAACCCTCGTAGCTGCCGTACGGGCCATGCTCCCG-CGCGA-GCTC 1918 Query 147168 CAATTCACAGCTTGCCTCGAGCGCTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAG 147227 || || || ||||| | || ||| |||| | || ||| ||| | ||||| || Sbjct 1917 CA--TCG-AG---GCCTCCATGGCGCCAAAGTACAGCGTCTCGAAGATGTTCTTGTTGAG 1864 Query 147228 GACGGTCGCTTCTTCGCTCTCGTAAGGCATA-CGCAGAAGCACAAAGGCATCGGCCAAAC 147286 || || || ||||||||| || || || | || || | || || || || | || Sbjct 1863 CTCGCGGGCCTCGTCGCTCTCG-AACGCGTAGCCCATGAGGATGAACGCGTCCGCGAGAC 1805 Query 147287 CCTGGATACCGACGCCGATAGGTCGATGCTTTTCGTTGCTGCGCTTCGCGCTC-GCTATG 147345 |||| | |||| |||||| || || || |||||||||| ||| ||| | || Sbjct 1804 CCTGCACGCCGATGCCGATCGGGCGGTGGCGCAGGTTGCTGCGC-TCGGCCTCGGGGATC 1746 Query 147346 GGATAGTGGTTGCGATCAATAATCTTGTTGAGGTTACGCACTACAACTTTAGTTATTGTT 147405 || |||| |||| || || | |||||| ||||| ||| || || || || || Sbjct 1745 GGGTAGTAGTTGATGTCGATGACCTTGTTCAGGTTGCGCGTGACGACCTTGGTGATGTCG 1686 Query 147406 TTGAGTTTCTCGAAATCATAAGTCCCGTCTTC-GACACGTACGCATTGGTTCACGGCGAT 147464 | ||| |||| ||| ||| | ||| ||| || | ||| || |||| || ||||| Sbjct 1685 TAGAGCTTCTTGAAGTCAAAGGTCTTGTCGTCGGTCACAAAC---TTGG-ACAGCGCGAT 1630 Query 147465 AGACGCCAGATTGCAGACGGCCGTCTCTTC-GGCGTCGCTGTACTGCACGATTTCGGCGC 147523 ||||| || ||||| || || ||| || |||| || |||||| | | ||| || Sbjct 1629 GGACGCGAGGTTGCACACCGCGACCTCATCGGGCGACG-TGTACTCGAGCACCTCGCAGC 1571 Query 147524 ACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGT 147583 | |||||||| | || || | || ||||| || || || ||||||| || Sbjct 1570 AGAGGTTGCTCGAGCGGATCGTGCCGAGGTTCTGCTGGTTCGACTTGCGGTTGCACGAGT 1511 Query 147584 CTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCAACGAT---AAACCTAT 147640 | ||| | ||||||||||| ||| ||||||| |||| || | ||| |||| Sbjct 1510 CCTTGTACAGCATGTACGGCGTGCCTGTCTCGATCTGCGACTCGAGGATCGCGAACC--- 1454 Query 147641 GCAGGTCCTGCGCTCGCACCCGCTGCCGATAGCGGCCCTCGTTTTCGTACCGCTCGTACA 147700 || | |||||| || | | || || |||||||||| |||||| | | ||||| Sbjct 1453 AGAGCTGCTGCGCGCGGATCGTCTTGCGCGCGCGGCCCTCGCGCTCGTACTGGTGGTACA 1394 Query 147701 ACCGCTCAAACTCGTCGCCGTAGCAATCG-GCA-AGGCCGGGACACTGATGCGGACACAT 147758 | ||| ||||||||||| | ||| | | || || || || | ||| || | Sbjct 1393 GCGCCTCGAACTCGTCGCCCCA--CGTCGTGTAGAGCCCCGGCGCCTCGTTCGGGCAGAA 1336 Query 147759 CAGCGACCACATGTCGTCCGCGTTAACGCGTCGCATAAACAGATCCGGCACCCACAGCGC 147818 ||| |||| | ||| || | ||||| ||| || ||||| || | ||||| ||| Sbjct 1335 CAGGCTCCACTCGCCGTTGGCCTCGACGCGCTTCATGAAGAGATCGGGGATCCACATCGC 1276 Query 147819 GTACATAAGAT--CGCGCGCTTTGCAATCCTCGGCGCCCATGTTGCGTTTCAAAT-TAAG 147875 ||| | |||| ||||||| |||| |||| ||| ||| || | | | | Sbjct 1275 GTAGAAGAGATCACGCGCGCGGTGCA--GCTCGTTGCCGTGGTTCTTCTTGAGGTCCAGG 1218 Query 147876 CACGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGCTT 147935 || | | |||||||||||||||| || || | ||| | || | || || || ||||| Sbjct 1217 AACTCGA-AGATGTCGGCGTGCCACGGCTCCAGGTACATCGCGAACGAGCCCTTGCGCTT 1159 Query 147936 ---TCCGCCCTGGTCGACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAG 147992 |||||||||||||| | |||| || ||| ||| || ||||||| |||||| | || Sbjct 1158 GCCGCCGCCCTGGTCGACGTAGCGCGCCGTGTCGTTGAAGACGCGCAGCATGGGCACGAG 1099 Query 147993 GCCGCTCGCAGTGCCGTTGGTGGAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCAC 148052 |||| ||| | |||||| ||| ||| | | | || || | | |||||| Sbjct 1098 GCCGTTCGACGAGCCGTTCGTGCCGCGGATGTACGAGTTGGTCGCGCGGATGTTGTGCAC 1039 Query 148053 GTTAACGCCAATGCCGCCGCCGTACTTTGATATGGCAGCGCAATCGCCCAA---TGTCGT 148109 | | ||||| |||||||| | |||| || ||| ||||| | || | |||| Sbjct 1038 GCTGACGCCGATGCCGCCAGCCCACTTGGAGATGCACGCGCACT-GCTTGAGCGTGTC-- 982 Query 148110 GTAGATGCCGTCGATGCTGTCGTTTTTGACGCCAAGCAAAAAACACGAACACATTTGCGG 148169 ||||||||| ||||| ||||| || | | | |||| || ||||| ||| ||||| Sbjct 981 GTAGATGCCCTCGATCGAGTCGTCCTTCATGGCGAGCAGGAAGCACGACGACAGCTGCGG 922 Query 148170 AATCCGCGTTCCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCAT 148229 | |||| ||||| ||| || || || |||||||||| || || |||| ||| Sbjct 921 GCGCGGCGTGCCCGCGTTGAACAGCGTCGGCGTCGCGTGCGTGAAGAAGCTTTGCGACAT 862 Query 148230 -CATGCGATACGTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGC 148288 | || |||||||| | ||| | || ||||||| ||| ||||| | |||||| | Sbjct 861 GTACTCG-TACGTCTCGAGCGCGGCGTCAATGTCGTGCTTGTGGATGCCGACCGCGACAC 803 Query 148289 GCATGAGCATGTGCTGTGGTCGTTCGGCAACTTGATTGTTGATCTTGAGAAGATATCCAT 148348 ||| | ||| ||||| || || || || || | | || ||| || || | Sbjct 802 GCAGAATCATCTGCTGCGGACGCTCCGCGACCTTGCCGCCGACGCGGAGGAGGTACGACT 743 Query 148349 TTTCGAGGGTTTTGTAACCAAAGTACTTGTAATCAAAATCTAGCTCGT 148396 | ||||| || ||| | |||||||| | ||| ||||| || | |||| Sbjct 742 TCTCGAGCGTCTTGAAGCCAAAGTAGTCGTACTCAAAGTCGCGGTCGT 695 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476544337406280