Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950835.1_202016-12-27] 11,223 sequences; 35,561,321 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq18 224 1e-53 >seq18 Length=101766 Score = 224 bits (248), Expect = 1e-53 Identities = 439/638 (69%), Gaps = 12/638 (2%) Strand=Plus/Plus Query 146872 ATCTTGAGCTTGGGGAAGGGTCGGGGGTTCCTGGCCAGCTGAATTTTCAGGGGCTCCACG 146931 ||||| ||| | ||||| | ||| || | | | ||||| | || |||||||| || Sbjct 82201 ATCTTCAGCGTCGGGAAAGTTCGCGGAGTGCGACCAAGCTGCACCTTGAGGGGCTCGACA 82260 Query 146932 TGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCCG 146991 |||| ||||||| ||||||||| || | ||||| | || || || | || || Sbjct 82261 TGGTCCAGGTAGATGTGCGCGTCACCAATCGTGTGGATGAACTCGCCAGCACGCAGCCCT 82320 Query 146992 GTCACGTGGGCCACCATGTAG-GTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCC 147050 || || || || || | || | || | ||||| |||||| || |||||||| || || || Sbjct 82321 GTGACCTGCGCGACGA-GTCGCGTCAACAGCGCGTAGCTCGCGATGTTGAATGGCACGCC 82379 Query 147051 CAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGGCCACGTA 147110 || ||||| || | || | ||||||| ||| || |||||||| || | || ||||| Sbjct 82380 GAGACCCATATCTGCTGAGCGTTGGTACATCTGACAGGAGAGCTCACCATTCGCAACGTA 82439 Query 147111 AAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGGTTCCA 147170 ||||||||| | ||||||||||||||||| ||||| | |||||||| |||||||| Sbjct 82440 AAACTGGCAGAACATGTGGCACGGCGGCAGAGCCATCTCCTTGAGGTCCGCAGGGTTCCA 82499 Query 147171 GGCCGAGACCACCAGCCGCCTGCTC-TCGGGGTTCCTCTTAATCTCTTCGATAACCCACC 147229 ||||| | | | |||| | || | |||||| |||| | | || ||| ||| | Sbjct 82500 TGCCGACATGATGATGCGCC-GATCGTTCGGGTTCGTCTTGAGTTTTTGGATCACCTCCG 82558 Query 147230 TCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCA--GTCCACGTACCTGGCCCC 147287 |||||||| || |||||||| |||| | | | ||| || | |||| |||| || Sbjct 82559 CGAGCTGGTCGACTCCCTGGCCAGAGTAG-TCGGCGTGCATCGT-CGTGTACTTGGCTCC 82616 Query 147288 AAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTC--TGTGCGAG 147345 |||||| | |||||||||||| |||||||| || || ||||| | | | ||| |||| Sbjct 82617 AAAGTGGCGCCACTGGAAGCCATACACTGGTCCAAGATCGCCAGCTTCGCGATGTCCGAG 82676 Query 147346 AAGCCCGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCCCTTG 147405 ||| | || || | || || || | | | |||||||| | |||||| Sbjct 82677 --GCCGATGCTCTCTAGGTATTCCTTCGATCCATTGCCATCCCAGATCTTGATACCCTTG 82734 Query 147406 GCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTCCTCCAAAACC 147465 | | ||| | | || ||| | ||||||||| |||||||||||| || Sbjct 82735 TCCTGCAATGTCTTGGCATTGGTATCGCCACTGATGAACCACAGCAGCTCCTCCGCGACA 82794 Query 147466 CCCCTCCAAAAGACCCTCTTGGTGGTCAGCAGGGGGAA 147503 || | ||| ||||| | |||||| || ||||| || || Sbjct 82795 CCGCGCCAGAAGACGCGCTTGGTCGTGAGCAGCGGAAA 82832 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583406143927200