Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950835.1_202016-12-27] 11,223 sequences; 35,561,321 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq2426 185 1e-41 seq9 149 7e-31 >seq2426 Length=2661 Score = 185 bits (204), Expect = 1e-41 Identities = 1097/1740 (63%), Gaps = 35/1740 (2%) Strand=Plus/Plus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 || ||| | ||| | |||| || || |||| || || | | |||||||| | | Sbjct 784 CCGCAGCAGATGATTCTGCGTGTCGCGGTCGGCATCCACAAGCACGACATTGACGCCGCG 843 Query 104282 TTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTC 104341 | ||||| ||||| | ||||| ||| | | |||| ||||| || || || || ||| Sbjct 844 CTCGAGACGTACGAGTACATGTCGCAAAGCTTCTTCACGCACGCGACGCCGACGCTGTTC 903 Query 104342 AATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGAC 104401 || || || || || | || || |||| |||||||| |||||| ||||| ||| Sbjct 904 AACGCGGGCACGCCGCGCCCGCAGCTGTCGTCGTGCTTCCTGCTCGCCATGAAGGACGAC 963 Query 104402 TCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGG 104461 || ||| | || ||||| | || || | | |||| ||| ||||| ||||||||||| Sbjct 964 TCGATCGAGGGCATCTACGACACGCTCAAGCAGTGCGCGTGCATCTCCAAGTGGGCTGGC 1023 Query 104462 GGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTA--TTCGGGGGACAA 104519 || || || | | | || | | | || | || |||||| | || || || | Sbjct 1024 GGCATCGGCGTCAGCGTGCACAACATCCGCGCGACCAA--CTCGTACATCCGCGGCACGA 1081 Query 104520 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 104579 | || || | || | | || ||||| ||||| || |||| ||| |||||||| | Sbjct 1082 ACGGCTCGTCGAACGGCCTCGTGCCCATGCTGCGCGTCTTCAACGACACGGCGCGCTACG 1141 Query 104580 TAAATCAAGCTGGGCGT---CGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACG 104636 | | || | || | || ||||| || |||| | || || ||||| ||||||| Sbjct 1142 TCGACCAGGGCGGCGGCAAGCGCAAGGGCTCGTTCGCGATGTACCTGGAGCCGTGGCACG 1201 Query 104637 CGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGC- 104695 | || ||| | |||||||| || | ||||| || ||||| | | | | || Sbjct 1202 CCGACATCTTCGAGTTCCTGGACCTCAAGAAGAACCACGGCAACGAGCTG-CACCGCGCG 1260 Query 104696 CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGT 104755 || |||||||||| ||| | ||||| || ||||||||||||||| | || |||| | Sbjct 1261 CGTGATCTCTTCTACGCGATGTGGATCCCCGATCTCTTCATGAAGCGCGTCGAGGCCAAC 1320 Query 104756 GGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGT-GGGTGA 104814 ||| | ||| || || || || || |||| || || |||| | | | ||| ||| || Sbjct 1321 GGCGAGTGGAGCCTGTTCTGCCCGAACGAGGCGCCGGGGCTCTAC-ACGACGTGGGGCGA 1379 Query 104815 GGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTGCC 104874 ||||| || || || ||| |||||||| || || || ||| |||| | | Sbjct 1380 CGAGTTCGAGGCGCTGTACCACCAGTACGAGCGCGAGGGCCGCGCGCGCAAGACGATCCG 1439 Query 104875 AGCTGCCG-ATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACA 104933 || || | | | ||| || || ||| |||| || | |||||| || || || |||| Sbjct 1440 CGC-GCAGCAGCTCTGGTTCGCGATCCTCGAGTCGCAGATCGAGACAGGCACGCCGTACA 1498 Query 104934 TGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGAT---CA 104990 |||| ||||| ||| | || |||| ||| || || |||| | || ||| | Sbjct 1499 TGCTGTACAAGGACTCGTGCAACCGCAAGTCGAACCAGCAGAACCTCGGCACGATCCGCT 1558 Query 104991 AGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGT 105050 ||| ||| ||||| || | | || | || |||||| || |||| Sbjct 1559 CGAG---CAACCTCTGCTGCGAGGTGCTCGAGTACACGTCGCCCGATGAGGTCGCGGTGT 1615 Query 105051 GTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATT 105110 | |||||||| || ||||| || |||||| |||| || ||| ||||| ||||| | Sbjct 1616 GCAACCTCGCGTCCATCGCGCTGTCCAAGTTTGTG--ACCGACGAC-AAGACCTTTGACT 1672 Query 105111 ATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATA 105170 | || ||| |||| | || || ||||| ||||| |||| || || || | Sbjct 1673 TCAAGAAGCTCTACGACATCACCAAGGTCGTCACGCGCAACCTGAACAAGGTCATCGACA 1732 Query 105171 GAAATTTTTACCC---CGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTG 105227 || | ||||| | ||| | | || | || || | ||||| || || | Sbjct 1733 TCAACTACTACCCGATCCCCGAGGCCGAGCGCA---GCAACCTGCGCCACCGCCCGATCG 1789 Query 105228 GTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCG 105287 | |||| || |||||||||||||| | ||||| || || |||| || || || Sbjct 1790 GCATCGGCGTGCAGGGTCTCGCGGACGCGTTCATCCTCATGGGCTACGCGTTCGAGAGCG 1849 Query 105288 ACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGG 105347 |||| || || |||| | ||| || ||||| |||| | ||| | |||| Sbjct 1850 ACGAGGCCCGCGAGCTCAACAAGAACATCTTCGAGACGCTGTACTTTGGCGCCATGGAGG 1909 Query 105348 CGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTT 105407 | ||| | || || |||| || || | | || |||||||| || | | Sbjct 1910 CCTCGATGGAGCTCGCGCGGGAGCATGGCCCGTACGGCAGCTACGAGGGTTCGCCCG-TG 1968 Query 105408 CACAAGGGGTGCTT-CAATTTGATATGTGGGAAGGTGA----GACCAAGCTTCACTACGA 105462 |||||| ||| || || || ||||||| || | ||| | || || || Sbjct 1969 AGCAAGGGCATCTTCCAGTTCGACATGTGGG-GCGTCACGCCGACGTCGGGTCTCTGGGA 2027 Query 105463 CTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGC 105522 ||||| || ||||||| || || | || | || | || ||| || || | || Sbjct 2028 CTGGGCCGCGCTCAAGGCGAGCGTCGCGCAGTACGGCGTGCGCAACTCGCTGCTGCTCGC 2087 Query 105523 TCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTA 105582 || ||||| || || || || || || ||| | || || || || | | || || | Sbjct 2088 GCCGATGCCGACGGCGTCGACTGCGCAGATCCTCGGCAACAACGAGTCGATCGAGCCGTT 2147 Query 105583 CACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCA 105642 |||||| ||||| || | | ||||| || ||||| ||| || |||||| | Sbjct 2148 CACGACCAACATGTACAACCGCCGCGTGCTCGCCGGCGAGTTCACGATCGTGAACAAGTA 2207 Query 105643 TCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGT 105702 ||| || | || |||| ||| | || ||||| | || || | | || | Sbjct 2208 CCTCATGAAGGAGCTCATCGAGCTCGGCATCTGGACGCCCGAGGTGCGCAACCAGATCCT 2267 Query 105703 GAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAATTAAGAAGTTGTA 105762 | | || || | || || | | || || | | | ||| || ||| Sbjct 2268 CCACGACCACGGCTCGGTGCAGAACGTGCGCGTGATCCCGGACGCCGTGAAGGAGAAGTA 2327 Query 105763 CCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGCAGATCGTGGTCG 105822 | || || ||||| |||||| ||||| ||| ||||||||||||| || || || Sbjct 2328 CAAGACCGTGTGGGAGATCAAGCAGAAGGCTGTGCTTGACATGGCCGCTGACCGCGGCGC 2387 Query 105823 CTTCATTGATCAAAGTCAAAGTATGAATCTCTTCATGGAAAGTCCAACGATGTCCAAGCT 105882 || ||| || || || | || | ||| | || ||||| |||||| Sbjct 2388 CTACATCTGCCAGAGCCAGTCGCTCAACGTGCACATCGCGGAGCCGACGATCAGCAAGCT 2447 Query 105883 CTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTATTACCTCCG 105942 | || |||||| | ||| ||||||||||||||||| ||||| ||||| ||||| || Sbjct 2448 GACGTCCATGCACTTCTACGCGTGGAAGAAGGGTCTCAAGACGGGCATGTACTACCTGCG 2507 >seq9 Length=143240 Score = 149 bits (164), Expect = 7e-31 Identities = 199/274 (73%), Gaps = 2/274 (1%) Strand=Plus/Minus Query 94672 CTCATAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCTTTGAAGCCATCCAA 94731 ||||| || | ||| || ||||| | |||||||| || || | |||||| | Sbjct 120366 CTCATTGATACGTACATCAAGGACCAGACGGAGAAGAACCACCTTCTCCGTGCCATCGAG 120307 Query 94732 ACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGATACAAAGTCG 94791 || |||| || | || ||||| ||| | ||||| | ||||||| || | | || Sbjct 120306 ACCATTCCATGCGTGCAGAAGAAGGCGCACTGGGCGCTCAAGTGGTGCGACTCGC-GCCG 120248 Query 94792 CGTTCCTTT-GCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGG 94850 || |||| |||||||| | |||| || || |||||||| || |||||||| || Sbjct 120247 CGCGGCTTTTGCTGAGCGCATTGTCGCGTTCGCTGCCGTTGAGGGCATTTTCTTCTCGGG 120188 Query 94851 TTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTC 94910 || |||||| | || | |||||||||||||| ||||||||||| || ||| ||||||| Sbjct 120187 CTCGTTCTGCTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGCCTCAGCTTCTC 120128 Query 94911 CAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 94944 |||||||| ||||| ||||| ||||| |||||| Sbjct 120127 GAACGAGCTCATCTCGCGTGATGAGGGCCTCCAC 120094 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583178975800520