Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950835.1_202016-12-27] 11,223 sequences; 35,561,321 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq18 205 8e-48 seq12 87.8 1e-12 >seq18 Length=101766 Score = 205 bits (226), Expect = 8e-48 Identities = 411/602 (68%), Gaps = 12/602 (2%) Strand=Plus/Plus Query 29864 AGCTGAGTCTTCAGCGGTTCCACGTTATCCAGGTAGACGTGAGCGTCTCCCAGGTTGTGG 29923 ||||| ||| || || || || | |||||||||| ||| ||||| || | ||||| Sbjct 82237 AGCTGCACCTTGAGGGGCTCGACATGGTCCAGGTAGATGTGCGCGTCACCAATCGTGTGG 82296 Query 29924 ACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAG 29983 | ||||| || | ||||| ||||| || || | | ||| | || | |||| Sbjct 82297 ATGAACTCGCCAGCACGCAGCCCTGTGACCTGCGCGACGAGTCGCGTCAACAGCGCGTAG 82356 Query 29984 CTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACAC 30043 || |||||||| || || || ||||| ||||| || | || | ||||| | |||||| Sbjct 82357 CTCGCGATGTTGAATGGCACGCCGAGACCCATATCTGCTGAGCGTTGGTACATCTGACAG 82416 Query 30044 GAGAGCTCTCCGT-CGCTCACGTAAAACTGACACATGGCGTGGCACGGAGGAAGAGCCAT 30102 |||||||| || | ||| ||||||||||| || | ||||||||| || |||||||| Sbjct 82417 GAGAGCTCACCATTCGCA-ACGTAAAACTGGCAGAACATGTGGCACGGCGGCAGAGCCAT 82475 Query 30103 GAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTT 30162 | ||| |||||||| || ||| ||||||||||| || | ||||| | Sbjct 82476 CTCCTTGAGGTCCGCAGGGTTCCATGCCGACATGATGATGCGCCGATCGTTCGGGTTCGT 82535 Query 30163 CCTGA---TGAGGTCCACGGCGTTTTGC-AGCTGATCCACCCCCATCCCCGAGTAGTCTG 30218 | ||| | || ||| | || ||||| || || ||| || |||||||| | Sbjct 82536 CTTGAGTTTTTGGATCAC----CTCCGCGAGCTGGTCGACTCCCTGGCCAGAGTAGTCGG 82591 Query 30219 CCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCA 30278 | ||| |||||||| ||||| || || | ||||||||| || ||||| ||||| | Sbjct 82592 CGTGCATCGTCGTGTACTTGGCTCCAAAGTGGCGCCACTGGAAGCCATACACTGGTCCAA 82651 Query 30279 GGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGG 30338 | || || |||| | || ||| ||| | | || | | || | || || ||| Sbjct 82652 GATCGCCAGCTTCGCGATGTCCGAGGCCGATGCTCTCTAGGTATTCCTTCGATCCATTGC 82711 Query 30339 CGTCCCAGATCTTTACCCCCTTCT-CAGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACG 30397 | ||||||||||| | ||||| | | | | || |||| || || || |||| | Sbjct 82712 CATCCCAGATCTTGATACCCTTGTCCTGCAATGTC-TTGGCATTGGTATCGCCACTGATG 82770 Query 30398 AACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGA 30457 |||||||||||||||||| |||| | ||| ||||| | |||||||||||| || ||| Sbjct 82771 AACCACAGCAGCTCCTCCGCGACACCGCGCCAGAAGACGCGCTTGGTCGTGAGCAGCGGA 82830 Query 30458 AA 30459 || Sbjct 82831 AA 82832 >seq12 Length=134298 Score = 87.8 bits (96), Expect = 1e-12 Identities = 104/136 (76%), Gaps = 4/136 (3%) Strand=Plus/Plus Query 52761 CCAGAGATGGGCGACAAGTTT-GC-GTCGTTCACGGCGCAAAAGGGGACGTGCGGAGCCG 52818 || ||||| ||||||||||| || |||| |||||| || ||||| |||||| | Sbjct 51430 CCCGAGATCGGCGACAAGTTCAGCAGTCGC-CACGGC-CAGAAGGGCGTGTGCGGCACGA 51487 Query 52819 TCCTGACCCAGGAGGACATGCCCTTCGACAAGGACGGGGTGGTGCCCGACCTCATCATCA 52878 ||| | ||||||||||||||| ||| || | ||||| || |||||||||||||| | Sbjct 51488 TCCGCAACCAGGAGGACATGCCGTTCAACGACGACGGCGTCTGCCCCGACCTCATCATGA 51547 Query 52879 ACCCCCACGCCTTTCC 52894 |||| |||| ||| || Sbjct 51548 ACCCGCACGGCTTCCC 51563 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406254824736516