Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950835.1_202016-12-27] 11,223 sequences; 35,561,321 total letters Query= NC_029079.1 Length=75339 Score E Sequences producing significant alignments: (Bits) Value seq341 188 3e-43 >seq341 Length=18574 Score = 188 bits (208), Expect = 3e-43 Identities = 345/499 (69%), Gaps = 21/499 (4%) Strand=Plus/Minus Query 66248 CATCGACGCTGAGCACTCCCTGGACCCTGAGTACGCCAAGGCGCTCGGTGTGGACCTCGA 66307 ||||||||| |||||| || | ||| | | ||||||||| |||||| || || | || Sbjct 5298 CATCGACGCCGAGCACGCCATCGACGCGCACTACGCCAAGCAGCTCGGCGTCAACATTGA 5239 Query 66308 CAACCTCGTGGTGGTTCAGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCT 66367 | | ||| | ||||| || | || |||||||| |||||||||| ||| || Sbjct 5238 CGAGCTCTACATCTCGCAGCCCGATTCGGGGGAGCAGGCGCTGGAGATCGCCGACACGCT 5179 Query 66368 CGTCAAGTCTGGCGAGCTGTCCA--TCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCG 66425 || |||||||| | ||| | |||||||||||||| |||||| || || |||||| Sbjct 5178 TGTGCGGTCTGGCG--CCGTCGACGTCGTCGTCGTTGACAGTGTGGCCGCGCTCGTGCCG 5121 Query 66426 CGCGCCGAGCTCGAAGGCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATG 66485 ||||| ||||| || ||||| || || ||| || ||| ||||| ||||| |||||| Sbjct 5120 CGCGCTGAGCTTGAGGGCGAGATGGGCGACCAGCAGATCGCGCTGCAGGCGCGGCTCATG 5061 Query 66486 TCGCAGGCCATGCGCAAGCTCACCGGCACCATCTC-CAGCA---CCAA---CACGCTGAC 66538 ||||| ||||||||||||| || ||| | |||| |||| || ||| | Sbjct 5060 AGCCAGGCGCTGCGCAAGCTCACGGG----ATCGCTGAGCAAGTCCAACTGCATGCTCA- 5006 Query 66539 GCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCAACGTGGGCTACGGCCCGAACGAGAC 66598 ||| | |||||| | ||| |||| | |||| | | || || || |||| Sbjct 5005 --TCTTTCTGAACCAGATCCGCCAGAAAGTGGGCATCCT---CTTTGGGTCGCCCGAGGT 4951 Query 66599 CACCACGGGCGGCAAGGCTTTGAGGTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCAT 66658 ||| ||||||||| ||| || | | |||||| || || || | || | || |||| Sbjct 4950 CACGTCGGGCGGCACGGCGCTGCGCTACTACGCGTCGGTGCGGCTCGACATTCGGCGCAA 4891 Query 66659 CGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACCCGGGTGAAGGTCGTCAA 66718 ||| | ||||||||||| ||| ||||||||| | | || ||||||| ||| Sbjct 4890 GGCCGCGATCAAGGAAGGCGACAAGGTCGTCGGCAACGAGATCGTCGTCAAGGTCGCCAA 4831 Query 66719 GAACAAGCTGGCCCCGCCG 66737 ||||||||| || ||||| Sbjct 4830 GAACAAGCTCGCGTCGCCG 4812 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 240927041415900