Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950835.1_202016-12-27] 11,223 sequences; 35,561,321 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq1222 165 2e-35 >seq1222 Length=6011 Score = 165 bits (182), Expect = 2e-35 Identities = 163/211 (77%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| || || ||||| || |||||||| || |||| |||||| | || || Sbjct 2194 AGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCC 2135 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || |||||||| || |||||||| ||||| || || || ||||| | ||| ||||||||| Sbjct 2134 TCGAGCTGCTTACCAGCGAAGATCAGGCGCTGCTGATCCGGAGGGATTCCCTCCTTGTCC 2075 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || || || || || ||| |||| || || || ||||| ||||||||| Sbjct 2074 TGGATCTTCTGCTTGACATTGTCAATGCTGTCCGAAGGCTCGACGTCGAGCGTGATCGTC 2015 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCA 211113 || || || |||||||| || || | ||||| Sbjct 2014 TTGCCGGTCAGAGTCTTGACGAAGATCTGCA 1984 Score = 89.7 bits (98), Expect = 1e-12 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 ||||||||||||||||| || || || || || ||| | || ||| || || || || Sbjct 1973 TCCTTGTCCTGGATCTTCTGCTTGACATTGTCAATGCTATCCGAGGGCTCGACGTCCAGG 1914 Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTTATG 211120 ||||||||||| |||||||| ||||| || || | ||||||||| || Sbjct 1913 GTGATCGTCTTCCCCGTGAGGGTCTTCACGAAGATCTGCATTTTCTG 1867 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1158985320100395