Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950835.1_202016-12-27] 11,223 sequences; 35,561,321 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq18 208 6e-49 >seq18 Length=101766 Score = 208 bits (230), Expect = 6e-49 Identities = 412/602 (68%), Gaps = 12/602 (2%) Strand=Plus/Plus Query 27130 AGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGG 27189 ||||| ||| || || || || || |||||||||| ||| ||||| || | |||||| Sbjct 82237 AGCTGCACCTTGAGGGGCTCGACATGGTCCAGGTAGATGTGCGCGTCACCAATCGTGTGG 82296 Query 27190 ACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAG 27249 | ||||| || | ||||| ||||| || || | | ||| | || | |||| Sbjct 82297 ATGAACTCGCCAGCACGCAGCCCTGTGACCTGCGCGACGAGTCGCGTCAACAGCGCGTAG 82356 Query 27250 CTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACAC 27309 || |||||||| || || || ||||| ||||| || | || | ||||| | |||||| Sbjct 82357 CTCGCGATGTTGAATGGCACGCCGAGACCCATATCTGCTGAGCGTTGGTACATCTGACAG 82416 Query 27310 GAGAGCTCTCCAT-CGCTTACGTAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCAT 27368 |||||||| |||| ||| ||||||||||| || | ||||||||| || |||||||| Sbjct 82417 GAGAGCTCACCATTCGCA-ACGTAAAACTGGCAGAACATGTGGCACGGCGGCAGAGCCAT 82475 Query 27369 GAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTT 27428 | ||| |||||||| || ||| ||||||||||| || | ||||| | Sbjct 82476 CTCCTTGAGGTCCGCAGGGTTCCATGCCGACATGATGATGCGCCGATCGTTCGGGTTCGT 82535 Query 27429 CCTGA---TGAGGTCCACGGCGTTTTGC-AGCTGATCCACCCCCATCCCCGAGTAGTCTA 27484 | ||| | || ||| | || ||||| || || ||| || |||||||| Sbjct 82536 CTTGAGTTTTTGGATCAC----CTCCGCGAGCTGGTCGACTCCCTGGCCAGAGTAGTCGG 82591 Query 27485 CCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCA 27544 | ||| |||||||| ||||| || || | ||| ||||| || ||||| ||||| | Sbjct 82592 CGTGCATCGTCGTGTACTTGGCTCCAAAGTGGCGCCACTGGAAGCCATACACTGGTCCAA 82651 Query 27545 GGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGG 27604 | || || |||| | || ||| ||| | | || | | || | || || ||| Sbjct 82652 GATCGCCAGCTTCGCGATGTCCGAGGCCGATGCTCTCTAGGTATTCCTTCGATCCATTGC 82711 Query 27605 CGTCCCAGATCTTTACCCCCTTCT-CGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACG 27663 | ||||||||||| | ||||| | | | | || |||| || || || |||| | Sbjct 82712 CATCCCAGATCTTGATACCCTTGTCCTGCAATGTC-TTGGCATTGGTATCGCCACTGATG 82770 Query 27664 AACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGA 27723 |||||||||||||||||| |||| | ||| ||||| | |||||||||||| || ||| Sbjct 82771 AACCACAGCAGCTCCTCCGCGACACCGCGCCAGAAGACGCGCTTGGTCGTGAGCAGCGGA 82830 Query 27724 AA 27725 || Sbjct 82831 AA 82832 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369456658689713