Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950855.1_202016-12-27] 60,602 sequences; 48,855,945 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq7871 127 2e-24 >seq7871 Length=1281 Score = 127 bits (140), Expect = 2e-24 Identities = 386/588 (66%), Gaps = 10/588 (2%) Strand=Plus/Minus Query 16956 ACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAA 17015 ||| |||||| ||||| ||||| || | ||||| || | ||| || ||||| || | Sbjct 938 ACAGCAGACACGCGAAGTCGCAGTGGAGGCCCTCATCGCGCGAGATGAGCTCGTTCGAGA 879 Query 17016 ATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAG 17075 | | | || ||||| || || ||||| | ||| || || | | |||||| || | Sbjct 878 AGCTGAGGCCAGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGCAGAACGAGCCCG 819 Query 17076 AAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTT 17135 | ||||| ||||||||||| | || ||||| | | || || || | | |||| | Sbjct 818 AGAAGAAGATACCCTCGACAGCAGCGAACGCAACGATGCGCTCAGCAAAAGCCGCG-CGG 760 Query 17136 TGTTA--CGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTC 17193 | | || | ||| || || |||| | || || | || | ||| || || || Sbjct 759 CGCGAGTCGCA-CCACTTGAGCGCCCAGTGCGCCTTCTTCTGCACGCACGGGATGGTCTC 701 Query 17194 TATGGC-CTTAAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTA 17252 ||||| | | | | |||| | | | |||| | || ||||| || ||||| | Sbjct 700 GATGGCGCGGAGAAGGTGGTTCTTCTCAGTCT-GGTCCTTGATGTACGTGTCAATGAGCA 642 Query 17253 GGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGG 17312 | ||||| || ||||| |||||||| ||||| ||||| ||||| || ||||| || | Sbjct 641 GCGAGTACACCTCCGAGTGGATGTTCTCAATGGCGATCTGGAATCCATAGAAGCAACGCG 582 Query 17313 CTTCCGCTATTTGAACTTCCACGTAGAATCGTTC--CGCTAGATTTTCGTTCACGATGCC 17370 | || | | || || || | ||| |||| ||| || || ||||| ||||| || Sbjct 581 CCTCAGGGACCTGCACCTCGCTGCTGAA--GTTCATCGCGAGGTTCTCGTTGACGATACC 524 Query 17371 GTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATATTTTTCGTCCGGTGTAAG 17430 ||||||||| ||||||||||| | | ||||| || || | |||| || || Sbjct 523 GTCGCTCGCCGCGAAAAACGCGAGGACGTGCTTGATAAAGTGGCGCTCGTTGTCCGTGAG 464 Query 17431 AACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGC 17490 || ||||||||| | || | | ||| | || |||| |||||| || || || Sbjct 463 GTTGCCCCAGTCCTTGAGGTCATGCACGAGATCGATCTCCTCGGCGGTCCAGAAGCTCGC 404 Query 17491 CACTGCCTTTTTATACATATTCCAAATATCATTGTATTGTATGGGGAA 17538 | | ||||| || ||||| | ||| | || || | || || ||||| Sbjct 403 CTCAGCCTTCTTGTACATCTGCCACACCTCGTTCTCCTGGATCGGGAA 356 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517153546269360