Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950855.1_202016-12-27] 60,602 sequences; 48,855,945 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq4160 147 2e-30 >seq4160 Length=1787 Score = 147 bits (162), Expect = 2e-30 Identities = 397/600 (66%), Gaps = 18/600 (3%) Strand=Plus/Plus Query 133133 GTTCTGCACGGACCCGTTTTCGGCCAAAATCTTGTTGCGCAATTCCGGAGTGTAAATGTC 133192 ||||||||| || |||| ||| | |||| |||||||| || || || | ||| | Sbjct 66 GTTCTGCACCGAGCCGTGGTCGTGGAGGATCTGGTTGCGCACCTCGGGCGTCCAGATGCC 125 Query 133193 GAGATCGATTAGCGCTTTGACGAGATACTGGTTGACCA-CTTGAAACTCGCCGGCGAGAA 133251 ||| ||||| ||| | || | ||| |||| ||| || | | |||| |||||| ||||| | Sbjct 126 GAGCTCGATGAGCTCCTTCATGAGGTACTTGTTCACGATCGTGAA-CTCGCCAGCGAGCA 184 Query 133252 CGCGTCTGAGATATACATTCGACGTGAACGGTTCGAAAGATTCGTTGTTGCCGAGTATCT 133311 |||| | | || | || | ||||||||| |||| || |||||||||||||| |||| Sbjct 185 CGCGGCGGTTGTACATGTTGGTCGTGAACGGCTCGATCGACTCGTTGTTGCCGAGGATCT 244 Query 133312 GCGCCGTCGTCGCCGTGGGCATGTACGCCACCAACAAAGAGTTTCTTACGCCGTACTTGT 133371 |||| |||| |||||| ||||| ||| | || || ||||| | |||||||||| Sbjct 245 GCGCAGTCGACGCCGTCGGCATCGGCGCGAGCAGCAGCGAGTTGCGCACGCCGTACTGCG 304 Query 133372 TTATGTTGCACTGCAATTCGTTCCAGTCCCACAGATTGTTGGAATGATAGACGCCGTTCT 133431 | | | || | || ||||||||| ||| |||| || | Sbjct 305 CGACGCTCGCCTTGAGCGCGGCCCAGTCCCAGAGA-----------CCCGACGTCG-GCG 352 Query 133432 CGTCGTCGTAGTTGTGAAAATGCAAAATACCCCTGCTCACCGGACTGTCCGTGTACGATT 133491 | || | | ||| || || || || ||| ||||||| || || ||| Sbjct 353 TGACGCCCCACATGTCGAACTGGAAGATGCCCTTGCTCACGGGCGAACCCTCGTAGCTGC 412 Query 133492 CATAGGGTCCGTTGATTTTG-GCCAGCTCGCAGCTA-GCCTCCAAAGCGGCAAAGTAAAT 133549 | || || ||| || | | || ||||| || | | ||||||| ||| ||||||| | Sbjct 413 CGTACGGGCCG-TGCTCCCGCGCGAGCTC-CATCGAGGCCTCCATGGCGCCAAAGTACAG 470 Query 133550 GGTTTCCGCGATTGAATAGTTGACGAACCTGGCATCGTCGCTATCGTAGGCGATGTCGAG 133609 || || ||| | ||||| | ||| |||||||| ||| | ||| | | | Sbjct 471 CGTCTCGAAGATGTTCTTGTTGAGCTCGCGGGCCTCGTCGCTCTCGAACGCGTAGCCCAT 530 Query 133610 AAGAACAAACGCGTCGGCCAAACCCTGTATGCCGACGCCGATGGGTCGATGTTTTTTATT 133669 || | |||||||| || | |||||| | ||||| |||||| || || || || Sbjct 531 GAGGATGAACGCGTCCGCGAGACCCTGCACGCCGATGCCGATCGGGCGGTGGCGCAGGTT 590 Query 133670 GCTCCTCTCCGACTCGGCCGTGGGATAGTGGTTGACGTCGATGATCTTGTTGAGATTGCG 133729 ||| | ||| | ||||| | || |||| ||||| |||||||| |||||| || ||||| Sbjct 591 GCTGCGCTCGGCCTCGGGGATCGGGTAGTAGTTGATGTCGATGACCTTGTTCAGGTTGCG 650 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433509978560584