Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950855.1_202016-12-27] 60,602 sequences; 48,855,945 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq7871 154 2e-32 seq1899 118 2e-21 >seq7871 Length=1281 Score = 154 bits (170), Expect = 2e-32 Identities = 582/889 (65%), Gaps = 52/889 (6%) Strand=Plus/Plus Query 125022 TGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCT-GTC 125080 ||| | |||||||| |||||| |||| ||| ||||| | ||| ||| ||||||| || Sbjct 380 TGGCAGATGTACAAGAAGGCTGAGGCGAGCTTCTGGACCGCCGAGGAGATCGATCTCGTG 439 Query 125081 CAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCGCA 125140 || | |||| | || |||| | | | || || | ||||| | ||||| ||| Sbjct 440 CATG-ACCTCAAGGACTGGGGCAACC---TCACGGACAACGAGCGCCACTTTATCAAGCA 495 Query 125141 CATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT---GTTGACACG 125197 | | | || || || || | ||| || ||||||||||| || || | ||| || Sbjct 496 CGTCCTCGCGTTTTTCGCGGCGAGCGACGGTATCGTCAACGAGAACCTCGCGATGA-AC- 553 Query 125198 ATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGAT 125257 ||| ||| || | || |||| | ||||| || |||||||| ||| || Sbjct 554 -TTCAGCAGCGAGGTGCAGGTCCCTGAGGCGCGTTGCTTCTATGGATTCCAGATCGCCAT 612 Query 125258 TGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCCGC- 125316 ||||||| | |||||||| ||||||| || ||||||| |||||| || | | Sbjct 613 TGAGAACATCCACTCGGAGGTGTACTCGCTGCTCATTGACACGTACATCAAGGACCAGAC 672 Query 125317 --AACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGGC 125374 | || ||| | ||| ||| ||||| || | |||| | | || ||||| Sbjct 673 TGAGAAGAACCACCTTCTCCG---CGCCATCGAGACCATCCCGTGCGTGCAGAAGAAGGC 729 Query 125375 TCAATGGGTGATTCGGTGGATCGA-TGACGACAAGTCTTCGTACGCCGACAGACTGGTGG 125433 || |||| | | |||| ||| | || | | | | | || || | | || | Sbjct 730 GCACTGGGCGCTCAAGTGGTGCGACTCGCGCCGCG-CGGCTTTTGCTGAGCGCATCGTTG 788 Query 125434 CATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGG-TAGTTTTGCGGCCATCTTTTGGCTC 125492 | ||||| || || ||||| |||||||| ||||| | ||| ||| ||||||| |||||| Sbjct 789 CGTTCGCTGCTGTCGAGGGTATCTTCTTCTCGGGCTCGTTCTGCT-CCATCTTCTGGCTC 847 Query 125493 AAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAG 125552 |||||||| || |||||||| || || | | |||||| | || || || || ||| Sbjct 848 AAGAAGCGTGGTCTCATGCCTGGCCTCAGCTTCTCGAACGAGCTCATCTCGCGCGATGAG 907 Query 125553 GGCCTACACTGTGACTTTGCCATTCTACTGT-TTCGCAACT-----ATCTGCGTCCCGAG 125606 ||||| ||||| ||||| || ||| |||| ||| | || | || || ||| Sbjct 908 GGCCTCCACTGCGACTTCGCGTGTCTGCTGTACTCGAAGCTTGTCAACAAGCTCCCGGAG 967 Query 125607 T-GCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACA 125665 | || ||||| || || |||| | | |||||| || || || | Sbjct 968 TCGCGCATCCA-CG------AGATCAT-----TCG----CGATGCTGTCGCTATTGAGAA 1011 Query 125666 AGAGTTTCTAACCGAATCCCTACCGGTC-AGCATGATTGGCATGAACTGCAAGCTAATGT 125724 ||||| | || || || |||||| ||| | || |||||||||| ||| |||| Sbjct 1012 GGAGTTCGTCCAGGACTCGCTTCCGGTCGAGC-TCATCGGCATGAACTCGTCGCTCATGT 1070 Query 125725 GCGAGTACATAGAGTT-TGTGGCAGATCGTCTACTGTACGAGTTGATTGGCCGCAAGATT 125783 || ||||||| ||||| ||| || ||||| || || ||| | | || | |||||| Sbjct 1071 GCCAGTACATTGAGTTCTGT-GCCGATCGCCTCCTCCACGCGCTTGGTGTCGCCAAGATC 1129 Query 125784 TACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAAC 125843 ||||| | ||| || || || | ||| || || || || |||| ||||||||| Sbjct 1130 TACAAGGTGTCGAACCCGTTCGACTGGATGGACATGATCTCGCTCCAGGGCAAGACCAAC 1189 Query 125844 TTTTTCGAGAAGAAGGTCAGCGAGTA--CAAACGCTACGGTGTCGGTGT 125890 || ||||||||| || ||||||| | || || ||| |||||||| Sbjct 1190 TTCTTCGAGAAGCGCGTGGGCGAGTACTCCAAGGC--CGGCGTCGGTGT 1236 >seq1899 Length=2641 Score = 118 bits (130), Expect = 2e-21 Identities = 220/319 (69%), Gaps = 8/319 (3%) Strand=Plus/Minus Query 127443 GAATCCGTGCGTCAGGTGGCCTCC-GTCGGGCAGATCGAGTCCCATGATTCTACCGTGCG 127501 ||| |||||||| ||||||||||| | |||| |||||||| |||||||| | |||||| Sbjct 1519 GAAACCGTGCGTGAGGTGGCCTCCAGACGGG-AGATCGAGACCCATGATGCGGTCGTGCG 1461 Query 127502 GTTTAACGATTCCAGTGTACACGGCAAAGTTGGCCATCGAGCCCGAGTACGGTTGTACAC 127561 | | || || ||||| ||||||||||||||| ||| |||||||| || || Sbjct 1460 GGCGCAGGAGACCCGTGTAGACGGCAAAGTTGGCCGGGCTGCCAGAGTACGGCTGCACGT 1401 Query 127562 ACACTCCCCA---TTCGGACTCGTTCAAATTGAACGCTCTGAGACATCGCTGCTGTGCTA 127618 || ||||| |||| ||| || |||| |||| |||||||| | Sbjct 1400 TGACGCCCCACTTCTCGGGATCGAGGCCAT---ACGCCTTGAGCGCGCGCTGCTGGCAGA 1344 Query 127619 GCAGTTCGATGCGATCGATAAACTCGTTACCACCATAGTATCGCTTTCCGGGCCTACCCT 127678 || ||||| | ||||| | |||||| ||||||||||| |||| ||| ||||| Sbjct 1343 TCACCTCGATCTGGTCGATGACCTCGTTGCCACCATAGTAGCGCTGGTGCGGCAGACCCT 1284 Query 127679 CCGAGTACTTGTTGATGAGACACGAACTCATGCATTCTCGCACCGGTAGAGTGGTAAAGT 127738 | | |||||||||| | || ||||| | || || || || | | | ||| |||| Sbjct 1283 CGGCGTACTTGTTGGTCAGGCACGAGCCCAGACACTCCATGACAGCGCGCGAGGTGAAGT 1224 Query 127739 TTTCCGATGCGATCAACTC 127757 | || || || |||| ||| Sbjct 1223 TCTCGGACGCAATCAGCTC 1205 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740497829129520