Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950855.1_202016-12-27] 60,602 sequences; 48,855,945 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq58936 127 3e-25 >seq58936 Length=308 Score = 127 bits (140), Expect = 3e-25 Identities = 189/268 (71%), Gaps = 0/268 (0%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| ||||| ||||||| ||||| || |||||||| || ||||| ||||| || || Sbjct 39 CGCCAAGCGCCATCGCAAGGTGCTTCGTGACAACATCCAGGGCATCACGAAGCCGGCGAT 98 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 || ||||| ||||| || ||||| |||||||| || || | |||| || |||| Sbjct 99 TCGCCGTCTCGCTCGCCGAGGTGGTGTCAAGCGCATCAGCGGTCTCATCTACGAGGAGAC 158 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | ||| | ||| | |||||| ||| ||| |||| ||| | || || || || Sbjct 159 CCGCGGTGTGCTCAAGGTGTTCCTCGAGAACGTGATCCGCGATTCGGTCACGTACACGGA 218 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||| || || ||||||||||| | |||||| ||||||| || | || || || || Sbjct 219 GCATGCGCGCCGCAAGACTGTCACGGCGATGGATGTCGTCTACGCGCTCAAGCGACAGGG 278 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699 || | | | || || ||||| ||||| Sbjct 279 ACGCACGCTCTACGGCTTTGGTGGTTAA 306 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79019791167186