Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950855.1_202016-12-27] 60,602 sequences; 48,855,945 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq4160 273 2e-68 >seq4160 Length=1787 Score = 273 bits (302), Expect = 2e-68 Identities = 954/1461 (65%), Gaps = 51/1461 (3%) Strand=Plus/Plus Query 145051 GTACTGATTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGT 145110 ||||| || |||| | |||||||| || | ||| || || |||| ||| | ||| Sbjct 150 GTACTTGTTCACGATCGTGAACTCGCCAGCGAGCACGCGGCGGTTGTACATGTTGGTCGT 209 Query 145111 GAAGGGTTCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTA 145170 ||| || || | |||||||| ||||| ||||| || || |||| || || ||||| Sbjct 210 GAACGGCTCGATCGACTCGTTGTTGCCGAGGATCTGCGCAGTCGACGCCGTCGGCATCGG 269 Query 145171 CGCCACCAATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCA 145230 ||| | || | || ||||||| ||||| || | || | |||| |||| |||| Sbjct 270 CGCGAGCAGCAGCGAGTTGCGCACGCCGTACTGCGCGACGCTCGCCTTGAGCGCGGCCCA 329 Query 145231 ATCCCATAG---CGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCT 145287 ||||| || ||| |||||| | ||| ||||||||||| |||| || ||||||| ||| Sbjct 330 GTCCCAGAGACCCGACGTCGGCGTGACGCCCCACATGTCGAACTGGAAGATGCCCTTGCT 389 Query 145288 GGCGGGGCTGCCTTGAAAGGAACTGTAACTGCCCCAAGTTTTG-GCGAGCTCGCAAC-TC 145345 |||| || | || | || || | || | | |||||||| || | Sbjct 390 CACGGGCGAACCCTCGTAGCTGCCGT-ACGGGCCGTGCTCCCGCGCGAGCTC-CATCGAG 447 Query 145346 GCCTCCAGAGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCA 145405 ||||||| ||||| || || | |||||| || | | |||||||| || || Sbjct 448 GCCTCCATGGCGCCAAAGTACAGCGTCTCGAAGATGTTCTTGTTGAGCTCGCGGGCCTCG 507 Query 145406 TCGCTCTCGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACG 145465 ||||||||| ||| || || || | || || || ||||| ||||| | || | | Sbjct 508 TCGCTCTCGAACGCGTAGCCCATGAGGATGAACGCGTCCGCGAGACCCTGCACGCCGATG 567 Query 145466 CCGATGGGCCGATGTTTCATGTTGCTCATCCTCGCCGACTC---GATAGGATATCGATTA 145522 ||||| || || || || ||||| | | | | | ||| ||| || || || Sbjct 568 CCGATCGGGCGGTGGCGCAGGTTGC---TGCGCTCGGCCTCGGGGATCGGGTAGTAGTTG 624 Query 145523 CGGTCGATAATTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCA 145582 |||||| | || |||| ||| ||| || ||||| || |||| | ||| | Sbjct 625 ATGTCGATGACCTTGTTCAGGTTGCGCGTGACGACCTTGGTGATGTCGTAGAGCTTCTGG 684 Query 145583 AAGTCAAACCGAGCCTCGTCAACGACCACACAGCTATTGAC--GGCGATCGACGCCAAAT 145640 |||||||| | || ||| || |||| | || | ||| ||||| ||||| | | Sbjct 685 AAGTCAAA---GGTCTTGTCGTCGGTCACA-AACT-TGGACAGCGCGATGGACGCGAGGT 739 Query 145641 TACAAACTGCCGTCTCCTC-GGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTA 145699 | || || || ||| || |||| || |||| | | | |||| ||| | ||||| Sbjct 740 TGCACACCGCGACCTCATCGGGCGACG-TGTACTCGAGCACCTCGCAGCAGAGGTTGCTC 798 Query 145700 CATTTGATGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGC 145759 | ||| || || || || ||||| || || | |||||||| ||||||||| ||| Sbjct 799 GAGCGGATCGTGCCGAGGTTCTGCTGGTTCGACTTGCGGTTGCACGAGTCCTTGTACAGC 858 Query 145760 ATGTACGGTCCGCCAGTCTCCACCTGCGTCTCCACGAT---AAAACGGTGCAAGTCCTGC 145816 |||||||| ||| ||||| | ||||| ||| | ||| || | | || | |||| Sbjct 859 ATGTACGGCGTGCCTGTCTCGATCTGCGACTCGAGGATCGCGAACCAGAGC---TGCTGC 915 Query 145817 GCACGCACCTGCTGCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAAC 145876 || || | | || | ||||||||| ||||| | ||| ||| |||| ||| Sbjct 916 GCGCGGATCGTCTTGCGCGCGCGGCCCTCGCGCTCGTACTGGTGGTACAGCGCCTCGAAC 975 Query 145877 GCGGAACCGTAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACG 145936 || || | | | || || || || ||| || || | ||| ||| || Sbjct 976 TCGTCGCCCCACGTCGTGTAGAGCCCCGGCGCCTCGTTCGGGCAGAACAGGCTCCACTCG 1035 Query 145937 CCGTTGGCGTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGT-- 145994 |||||||| | |||||||| ||| || | ||| || | ||||| |||||| | | | Sbjct 1036 CCGTTGGCCTCGACGCGCTTCATGAAGAGATCGGGGATCCACATCGCGTAGAAGAGATCA 1095 Query 145995 CGCGCGCTTTGCAATCCTCAGCACCCATGTTTC-GCTTCAAATTAAGCACACT-ATAGAT 146052 ||||||| |||| ||| | || || ||| ||| | | || | ||| |||| Sbjct 1096 CGCGCGCGGTGCA--GCTC-GTTGCCGTGGTTCTTCTTGAGGTCCAGGA-ACTCGAAGAT 1151 Query 146053 GTCCGCGTGCCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCGTTT---GCCACCCTG 146109 ||| ||||||||||| || | || | |||| | || || || || ||| ||||| Sbjct 1152 GTCGGCGTGCCACGGCTCCAGGTACATCGCGAACGAGCCCTTGCGCTTGCCGCCGCCCTG 1211 Query 146110 GTCCACGTGACGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTAC 146169 ||| |||| || || ||| ||| ||||| |||| ||||||| ||| |||| | | Sbjct 1212 GTCGACGTAGCGCGCCGTGTCGTTGAAGACACGCAGCATGGGCACGAGGCCGTTCGACGA 1271 Query 146170 GCCGTTCGT--AGAGTTTATTCTGGT--GCCGCGGGAGCGCACGCAATGAACATTCACGC 146225 ||||||||| | | | | | || | ||| ||| | | || || | |||| Sbjct 1272 GCCGTTCGTGCCGCGGATGTACGAGTTGGTCGC----GCGGATGTTGTGCACGCTGACGC 1327 Query 146226 CGAGACCGCCGCCGTACTTGGATATAGCGGCGCAGTCGCCGAGCGTCTCGTAGATGCCGT 146285 ||| ||||| | ||||||| || ||||| | |||||| ||||||||||| | Sbjct 1328 CGATGCCGCCAGCCCACTTGGAGATGCACGCGCACTGCTTGAGCGTGTCGTAGATGCCCT 1387 Query 146286 CAATGCTATCG--CTTCGAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGGCGT 146343 | || ||| |||| ||| ||||||| |||||||| ||| ||||| |||||| Sbjct 1388 CGATCGAGTCGTCCTTC--ATGGCGAGCAGGAAGCACGACGACAGCTGCGGGCGCGGCGT 1445 Query 146344 CCCCGCCGAGAACAACGTCGGGCTCGCGTGCGTAAACATTTTTCGGCTCATCATCCGATA 146403 ||||| ||||| |||||| |||||||||| || | || | ||| | || Sbjct 1446 GCCCGCGTTGAACAGCGTCGGCGTCGCGTGCGTGAAGAAGCTTTGCGACATGTACTCGTA 1505 Query 146404 CGTTTCGATAGCGTCTTGAATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATGAGCAT 146463 ||| |||| ||| | | |||||||| || ||||| | ||||| |||| | ||| Sbjct 1506 CGTCTCGAGCGCGGCGTCAATGTCGTGCTTGTGGATGCCGACGGCGACACGCAGAATCAT 1565 Query 146464 GTGTTGGGGCCGCTCCGCCAC 146484 || || || |||||||| || Sbjct 1566 CTGCTGCGGACGCTCCGCGAC 1586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471655238503680