Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950855.1_202016-12-27] 60,602 sequences; 48,855,945 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq4160 109 5e-19 >seq4160 Length=1787 Score = 109 bits (120), Expect = 5e-19 Identities = 287/435 (66%), Gaps = 5/435 (1%) Strand=Plus/Plus Query 129961 GTGTCGAGCAACGGCGATTCACGCGGACACATCAAACTCCACATTCCATCCGCTTCGACT 130020 |||| |||| ||||| || ||| || | || |||||| || | || ||||| Sbjct 991 GTGTAGAGCCCCGGCGCCTCGTTCGGGCAGAACAGGCTCCACTCGCCGTTGGCCTCGACG 1050 Query 130021 CGTTTCATAAACAAATCGGGTACCCACAGGGCGTACAACAAATCTCGCGCTTTTCTATCC 130080 || ||||| || | |||||| | ||||| ||||| || | ||| ||||| | Sbjct 1051 CGCTTCATGAAGAGATCGGGGATCCACATCGCGTAGAAGAGATCACGCGCGCGGTGCAGC 1110 Query 130081 TCGGCACCCATGTTACGTTTCAGTTCAAGGAAATCGTAAATGTCGGCGTGCCACGGTTCA 130140 ||| || ||| || || || ||||| ||| | ||||||||||||||||| || Sbjct 1111 TCGTTGCCGTGGTTCTTCTTGAGGTCCAGGAACTCGAAGATGTCGGCGTGCCACGGCTCC 1170 Query 130141 ACATAAATTGCCATTGCGCCCTTCCGTTT---GCCCCCTTGGTCAACGTGGCGCACGGCA 130197 | || || || | | |||||| || || ||| || ||||| |||| |||| | | Sbjct 1171 AGGTACATCGCGAACGAGCCCTTGCGCTTGCCGCCGCCCTGGTCGACGTAGCGCGCCGTG 1230 Query 130198 TTGTTGTAGACTCGCAACATTGCCTCCAATCCGTTGGCCGTGCCGTTTGTGCTCTCAATG 130257 | |||| |||| |||| ||| | | | | ||||| | || |||||| |||| ||| Sbjct 1231 TCGTTGAAGACACGCAGCATGGGCACGAGGCCGTTCGACGAGCCGTTCGTGCCGCGGATG 1290 Query 130258 AAACTGCCACGAGCCCGAACGTTATGAACGCTTAGACCTATGCCGCCGCCAAATTTTGAT 130317 | | || || | ||| || ||||| | || |||||||| | | || || Sbjct 1291 TACGAGTTGGTCGCGCGGATGTTGTGCACGCTGACGCCGATGCCGCCAGCCCACTTGGAG 1350 Query 130318 ATCAACGCGCAATCGCGT-AGCGTTTCATAAATGCCAACGATACTGTCTTCTTTAATGTT 130376 || ||||||| | || | ||||| || || ||||| |||| ||| || || ||| Sbjct 1351 ATGCACGCGCACT-GCTTGAGCGTGTCGTAGATGCCCTCGATCGAGTCGTCCTTCATGGC 1409 Query 130377 TAGGAGGAAACACGA 130391 || ||||| ||||| Sbjct 1410 GAGCAGGAAGCACGA 1424 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419417994408130