Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950855.1_202016-12-27] 60,602 sequences; 48,855,945 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq4160 457 9e-124 >seq4160 Length=1787 Score = 457 bits (506), Expect = 9e-124 Identities = 1120/1675 (67%), Gaps = 56/1675 (3%) Strand=Plus/Minus Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGG 93777 ||||| ||||||| |||||| || || ||||||||||| |||||| | | |||| | Sbjct 1646 TACGACTACTTTGGCTTCAAGACGCTCGAGAAGTCGTATCTCCTCCGCGTCGGCGGCAAG 1587 Query 93778 GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGAC 93837 || | ||||| ||||| ||| || | |||| |||||| |||| || ||| |||||| Sbjct 1586 GTCGCGGAGCGTCCGCAGCAGATGATTCTGCGTGTCGCCGTCGGCATCCACAAGCACGAC 1527 Query 93838 AT----GCCGAATGTTTTGCGGGCTTTCAGAG-ACATGCGGGACAAGAGGTATACCATG- 93891 || |||| | | || | | ||| ||||| | ||| || | || | Sbjct 1526 ATTGACGCCGC--GCT---CGAGACGTACGAGTACATGTCG--CAA-AGCTTCTTCACGC 1475 Query 93892 --GCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCC 93949 || || ||||| |||||||||||||| || ||| || ||| |||| ||||| |||| Sbjct 1474 ACGCGACGCCGACGCTGTTCAACGCGGGCACGCCGCGCCCGCAGCTGTCGTCGTGCTTCC 1415 Query 93950 TGATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGA 94009 || | | | |||| |||||| ||| || || | ||||| |||||| | || ||| Sbjct 1414 TGCTCGCCATGAAGGACGACTCGATCGAGGGCATCTACGACACGCTCAAGCAGTGCGCGT 1355 Query 94010 CCATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTT 94069 |||||| || | || || || ||||| |||| || ||| || | || || | | Sbjct 1354 GCATCTCCAAGTGGGCTGGCGGCATCGGCGTCAGCGTGCACAACATCCGCGCGACCAACT 1295 Query 94070 CCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCA 94129 | ||||||||||| || || ||| | || ||||||||||| || ||||| || ||||||| Sbjct 1294 CGTACATCCGCGGCACGAACGGCTCGTCGAACGGCCTCGTGCCCATGCTGCGTGTCTTCA 1235 Query 94130 ACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCT 94189 || || ||||||||||||| |||||||| || || | | | ||||| || |||||| | | Sbjct 1234 ACGACACGGCGCGCTACGTCGACCAGGGCGGCGGCAAGCGCAAGGGCTCGTTCGCGATGT 1175 Query 94190 ATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCA 94249 | || ||||| |||||||| ||| | | ||| | ||||| ||||||||||||| Sbjct 1174 ACCTGGAGCCGTGGCACGCCGACATCTTCGAGTTCCTGGACCTCAAGAAGAACCACGGCA 1115 Query 94250 ACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGA 94309 |||| ||| | | || | || ||||||||||| | ||| | || || || || |||| Sbjct 1114 ACGAGCTGCACCGCGCGCGTGATCTCTTCTACGCGATGTGGATCCCCGATCTCTTCATGA 1055 Query 94310 AACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGT 94369 | ||||||||| ||| || ||||| || || || || || || || || || | Sbjct 1054 AGCGCGTCGAGGCCAACGGCGAGTGGAGCCTGTTCTGCCCGAACGAGGCGCCGGGGCTCT 995 Query 94370 --CCGACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGC-AGGGCA 94426 |||||| | || || | || || | |||| | |||| | ||| ||||| Sbjct 994 ACACGACGTGGGGCGA-CGAG-TTCGAGGCGCTGTACCACCAGTACG-AGCGCGAGGGCC 938 Query 94427 AGGCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGG 94486 || | ||| || || | |||| ||| |||| | || ||| | | Sbjct 937 GCGCGCGCAAGACGATCCGCGCGCAGCAGCTCTGGTTCGCGATCCTCGAGTCGCAGATCG 878 Query 94487 AGACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGC 94546 |||| || ||||| ||||| ||| ||||||||| |||| |||||| ||||||||| Sbjct 877 AGACAGGCACGCCGTACATGCTGTACAAGGACTCGTGCAACCGCAAGTCGAACCAGCAGA 818 Query 94547 ACCTCGGGGTGATCAAGAGCTCG---AATCTGTGCACCGAGATTGTCGAGTATACTTCTC 94603 ||||||| |||| ||||| || || ||| |||| | ||||||| || || | Sbjct 817 ACCTCGGCACGATC---CGCTCGAGCAACCTCTGCTGCGAGGTGCTCGAGTACACGTCGC 761 Query 94604 CGGACGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATG 94663 | || ||| | || ||||| ||||| | |||||| ||||||| || ||| || Sbjct 760 CCGATGAGGTCGCGGTGTGCAACCTCGCGTCCATCGCGCTGTCCAAGTTTGTGACCGA-- 703 Query 94664 CCTACACGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGG 94723 | ||| | | || || | || |||| || || | |||| | | Sbjct 702 -CGACAAG---------ACCTTTGACTTCCAGAAGCTCTACGACATCAC--CAAGG-TCG 656 Query 94724 TCTTG---AACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGA 94780 || | |||||||||| ||| ||||||| |||| |||||| |||| ||||| ||| Sbjct 655 TCACGCGCAACCTGAACAAGGTCATCGACATCAACTACTACCCGATCCCCGAGGCCGAGC 596 Query 94781 ACTCAAACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGG 94840 | |||||| || || || |||||||||||||| |||||| ||||||||||| | Sbjct 595 GCAGCAACCTGCGCCACCGCCCGATCGGCATCGGCGTGCAGGGTCTCGCGGACGCGTTCA 536 Query 94841 TGATGATGCGTCTGC-CCTACGACTCTGTCGACG-CGGCGGGTTTGAATTTGAACATATT 94898 | | ||| | || | | | ||| | ||| | | ||| | | || |||||| || Sbjct 535 TCCTCATG-GGCTACGCGTTCGAGAGCGACGAGGCCCGCGAG-CTCAACAAGAACATCTT 478 Query 94899 CGAAAGCATTTATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGG 94958 ||| | | || | || |||||| | || | | | || | ||| ||| Sbjct 477 CGAGACGCTGTACTTTGGCGCCATGGAGGCCTCGATGGAGCTCGCGCG---GGAGCACGG 421 Query 94959 GCCACACGAATCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTG 95018 || ||| | | || |||||| || ||||||| || ||||||||| | || Sbjct 420 CCCGTACGGCAGCTACGAGGGTTCGCCCGTGAGCAAGGGCATCTTCCAGTTCGACATGTG 361 Query 95019 GGGTGTGAAGC---CCTCGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATGTTATCAA 95075 ||| || | || | |||||||| | ||||||| || || || || | Sbjct 360 GGGCGTCACGCCGACGTCGGGTCTCTGGGACTGGGCCGCGCTCAAGGCGAGCGTCGCGCA 301 Query 95076 ACACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGAT 95135 |||| ||| ||| ||||||| | || || ||||| ||||| || || |||||||| Sbjct 300 GTACGGCGTGCGCAACTCGCTGCTGCTCGCGCCGATGCCGACGGCGTCGACTGCGCAGAT 241 Query 95136 CCTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCT 95195 ||| ||||||||||||||| |||| || ||||| ||||| |||||||| | || ||||| Sbjct 240 CCTCGGCAACAACGAGTCGATCGAGCCGTTCACGACCAACATGTACAACCGCCGCGTGCT 181 Query 95196 CGCCGGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTCTCTGGGTGT 95255 ||| || || ||| | || | |||||| ||||| | ||| || | || || | Sbjct 180 CGCTGGCGAGTTCACGATCGTGAACAAGTACCTCATGAAGGAGCTCATCGAGCTCGGCAT 121 Query 95256 GTGGGGTGACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCC 95315 ||| | |||| ||||| | || | || | ||||||| || |||||| | | Sbjct 120 CTGGACGCCCGAGGTGCGCAACCAGATCCTCCACGACCACGGCTCGGTGCAGAACGTGCG 61 Query 95316 GCAAATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAG 95370 || ||||| | | | |||| | ||||||||||||||||||||| |||| Sbjct 60 CGTGATCCCGGACGCCGTGAAGGAGAAGTACAAGACCGTGTGGGAGATCAAGCAG 6 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494348434807920