Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950855.1_202016-12-27] 60,602 sequences; 48,855,945 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq10461 86.0 5e-12 seq394 82.4 6e-11 >seq10461 Length=1087 Score = 86.0 bits (94), Expect = 5e-12 Identities = 173/254 (68%), Gaps = 2/254 (1%) Strand=Plus/Plus Query 108347 TCGGTGTGACGGCCGGCGTCCATCGGATGTGGACCCACAAAGCCTACAAGGC-CACCGCC 108405 |||| | ||||| || | || || ||||| | ||| ||||||||| ||| ||| Sbjct 273 TCGGCATCACGGCGGGTGCGCACCGCCTGTGGGCGCACCGCAGCTACAAGGCGCACGGCC 332 Query 108406 CCGTTCAGGGTGTTCCTGGCGCTTTGCTTCTCGGTGGCAGGACAGAACACCATCCCGCAG 108465 ||| | | | ||||| ||| ||| |||| |||| ||| ||| ||| || Sbjct 333 TCGTGC-GCTTCTTCCTCATGCTCTGCAACTCGATGGCGAACCAGGGCACGATCTTCCAC 391 Query 108466 TGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACACGACGGCCGACCCACACAAC 108525 ||| | ||| ||| | || |||||||||||||| |||||| |||| ||||| ||| || Sbjct 392 TGGTGCCGCGACCACCGCGTGCACCACAAGTACTCGGACACGTCGGCGGACCCGCACGAC 451 Query 108526 GCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATGATGACCAAGGACCCCGAC 108585 | | | || |||| || ||||| |||| ||||| | ||| |||||||| | Sbjct 452 TCGGGCCGCGGCTTCTTCTTTGCGCACATGGGCTGGCTGCTCGTGAAGAAGGACCCGCGC 511 Query 108586 GTGATCTCGGCCGG 108599 ||||| |||||| Sbjct 512 GTGATTGAGGCCGG 525 >seq394 Length=5308 Score = 82.4 bits (90), Expect = 6e-11 Identities = 115/154 (75%), Gaps = 8/154 (5%) Strand=Plus/Plus Query 67901 CCCGAGATAGGAGACAAGTTCTGT--TCGGGAATGGCTCAGAAAGGCACGTGCGGGATGA 67958 |||||||| || ||||||||| | ||| | ||| ||||| ||| |||||| | || Sbjct 3555 CCCGAGATCGGCGACAAGTTCAGCAGTCGCCAC-GGC-CAGAAGGGCGTGTGCGGCACGA 3612 Query 67959 TGTTGAATCAGGAAGACATGCCGTTTA-CTTCTTCGG-GTATGACACCCGATCTCATCAT 68016 | || ||||| ||||||||||| | | | ||| || || | ||||||||||||| Sbjct 3613 TCCGCAACCAGGAGGACATGCCGTTCAACGACGACGGCGTCTGCC--CCGATCTCATCAT 3670 Query 68017 CAACCCGCACTGTCTCCCCAGCCGCATGACGATC 68050 ||||||||| | |||| |||||||||||| || Sbjct 3671 GAACCCGCACGGCTTCCCGAGCCGCATGACGGTC 3704 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381490827620688