Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950855.1_202016-12-27] 60,602 sequences; 48,855,945 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq4160 145 7e-30 >seq4160 Length=1787 Score = 145 bits (160), Expect = 7e-30 Identities = 297/436 (68%), Gaps = 9/436 (2%) Strand=Plus/Minus Query 122898 AAGGTCGCCGAACGTATTCAACATATGCTCATGCGCGTCGCTATAGGCGTGCACGGACGC 122957 |||||||| || ||| || || ||| | |||| ||||| | ||| | ||| | | Sbjct 1589 AAGGTCGCGGAGCGTCCGCAGCAGATGATTCTGCGTGTCGCCGTCGGCATCCACAAGCAC 1530 Query 122958 GACATCGAAAACGCGACCGAAACTTACGATTTGATGTCTCAAAAATTTTTCACGCACGCG 123017 ||||| || |||| ||| || ||||| | ||||| |||| || |||||||||||| Sbjct 1529 GACATTGACGCCGCGCTCGAGACGTACGAGTACATGTCGCAAAGCTTCTTCACGCACGCG 1470 Query 123018 AGTCCCACTTTGTTCGCCGCCGGCACGAAGTTGCCTCAGTTGTCTTCGTGTTTTTTGCTC 123077 | || || ||||| ||| |||||| | || ||| |||| ||||| || ||||| Sbjct 1469 ACGCCGACGCTGTTCAACGCGGGCACGCCGCGCCCGCAGCTGTCGTCGTGCTTCCTGCTC 1410 Query 123078 ACCTTGCGCGAAGACAGCATCACCGGTATCTATGAAACTTTGCGCGATTGCGCGTTGATT 123137 || || || ||| ||| || ||||| || || | | ||||||| || Sbjct 1409 GCCATGAAGGACGACTCGATCGAGGGCATCTACGACACGCTCAAGCAGTGCGCGTGCATC 1350 Query 123138 TCCAAATTTGGCGGCGGCATAGGCGTGAACGTGCACGACGTAAGAGGCCGCGGAAGCCG- 123196 ||||| | | |||||||| ||||| | ||||||| || | | | || || || Sbjct 1349 TCCAAGTGGGCTGGCGGCATCGGCGTCAGCGTGCACAACATCCGCG--CGACCAACTCGT 1292 Query 123197 -CATCAGAAGCACCGACGGAATCG-CCTCCGGGCTCGAATCCATGCTGCGAGTTTACAAT 123254 |||| | |||| |||| ||| | ||| |||| |||||||||| || | ||| Sbjct 1291 ACATCCGCGGCACGAACGG-CTCGTCGAACGGCCTCGTGCCCATGCTGCGTGTCTTCAAC 1233 Query 123255 AACGCCGTGCGGCACGTCGACCAG---GGCGGCAAACGCAAAGGCGCGATGGCGATCTAT 123311 || | | ||| ||||||||||| |||||||| ||||| ||| || | ||||| || Sbjct 1232 GACACGGCGCGCTACGTCGACCAGGGCGGCGGCAAGCGCAAGGGCTCGTTCGCGATGTAC 1173 Query 123312 CTAGAACCGTGGCACG 123327 || || |||||||||| Sbjct 1172 CTGGAGCCGTGGCACG 1157 Score = 87.8 bits (96), Expect = 2e-12 Identities = 174/257 (68%), Gaps = 3/257 (1%) Strand=Plus/Minus Query 124056 CACGGCGCGTACGAAAGTTACGCGGGCAGCCCGGCGAGCCGAGGTATTTTGCAGTACGAC 124115 |||||| |||||| || |||| ||| || | |||| || || || |||| |||| Sbjct 425 CACGGCCCGTACGGCAGCTACGAGGGTTCGCCCGTGAGCAAGGGCATCTTCCAGTTCGAC 366 Query 124116 ATGTGGAATGCTACACCGACAAA---TTTGTGGGACTGGAGCGTTTTAAAACAACGCATA 124172 |||||| | || ||||| | | ||||||||| || | || || | Sbjct 365 ATGTGGGGCGTCACGCCGACGTCGGGTCTCTGGGACTGGGCCGCGCTCAAGGCGAGCGTC 306 Query 124173 TCGACGCACGGTTTGCGTAACTCGCTGTTGGTGGCGTACATGCCGACGGCAACCACTGCT 124232 || | |||| |||| ||||||||| || | ||| ||||||||||| | ||||| Sbjct 305 GCGCAGTACGGCGTGCGCAACTCGCTGCTGCTCGCGCCGATGCCGACGGCGTCGACTGCG 246 Query 124233 CAAATTTTAGGAAACAACGAATCCTTCGAGCCGTTCACTAACAATTTGTACGTGCGACGA 124292 || || | || |||||||| || ||||||||||||| | ||| ||||| || || Sbjct 245 CAGATCCTCGGCAACAACGAGTCGATCGAGCCGTTCACGACCAACATGTACAACCGCCGC 186 Query 124293 GTGTTAGCCGGCGATTT 124309 ||| | || ||||| || Sbjct 185 GTGCTCGCTGGCGAGTT 169 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451660796275920