Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950855.1_202016-12-27] 60,602 sequences; 48,855,945 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq43746 93.3 5e-14 seq36561 93.3 5e-14 >seq43746 Length=404 Score = 93.3 bits (102), Expect = 5e-14 Identities = 78/96 (81%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 ||| || |||| || |||||| ||||| |||||||| || || ||||| |||| || Sbjct 309 CACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTC 368 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTC 46479 |||||||||||||||||| |||| ||||||||| || Sbjct 369 GAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGATC 404 >seq36561 Length=468 Score = 93.3 bits (102), Expect = 5e-14 Identities = 78/96 (81%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 |||||| || | || |||||| ||||| |||||||| || || ||||| |||| || Sbjct 373 CACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCGTCCTC 432 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTC 46479 |||||||||||||||||| |||| ||||||||| || Sbjct 433 GAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGATC 468 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 564810217781040