Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950855.1_202016-12-27] 60,602 sequences; 48,855,945 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq4160 165 1e-35 seq7871 158 1e-33 >seq4160 Length=1787 Score = 165 bits (182), Expect = 1e-35 Identities = 933/1474 (63%), Gaps = 35/1474 (2%) Strand=Plus/Minus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 || ||| | ||| | |||| ||||| |||| ||||| | | || ||||| | | Sbjct 1574 CCGCAGCAGATGATTCTGCGTGTCGCCGTCGGCATCCACAAGCACGACATTGACGCCGCG 1515 Query 111672 TTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTTC 111731 | ||||| ||||| | ||||| | | | |||| ||||| || || || || ||| Sbjct 1514 CTCGAGACGTACGAGTACATGTCGCAAAGCTTCTTCACGCACGCGACGCCGACGCTGTTC 1455 Query 111732 AACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGAT 111791 ||||| || || || | || || |||| || ||||| | || | ||||| || Sbjct 1454 AACGCGGGCACGCCGCGCCCGCAGCTGTCGTCGTGCTTCCTGCTCGCCATGAAGGACGAC 1395 Query 111792 TCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGT 111851 || ||| | ||||| |||| ||| |||| | || || ||||| ||||||||||| Sbjct 1394 TCGATCGAGGGCATCTACGACACGCTCAAGCAGTGCGCGTGCATCTCCAAGTGGGCTGGC 1335 Query 111852 GGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTA--TTAGAGGTACAA 111909 || ||||| | | | || | || | || | ||| |||||| | | || || | Sbjct 1334 GGCATCGGCGTCAGCGTGCACAACATCCGCGCGACCAA--CTCGTACATCCGCGGCACGA 1277 Query 111910 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 111969 | || || | || | | || ||||| || || || |||| ||| |||||||| | Sbjct 1276 ACGGCTCGTCGAACGGCCTCGTGCCCATGCTGCGTGTCTTCAACGACACGGCGCGCTACG 1217 Query 111970 TAAACCAAGCTGGGCGT---CGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACG 112026 | |||| | || | |||||||| || |||| | || || ||||| ||||||| Sbjct 1216 TCGACCAGGGCGGCGGCAAGCGCAAGGGCTCGTTCGCGATGTACCTGGAGCCGTGGCACG 1157 Query 112027 CGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGC- 112085 | || ||| | |||||||| || | ||||| || | ||| | | | | || Sbjct 1156 CCGACATCTTCGAGTTCCTGGACCTCAAGAAGAACCACGGCAACGAGCTG-CACCGCGCG 1098 Query 112086 CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGT 112145 || |||||||||| ||| | ||||| || ||||||||||||||| | || |||| | Sbjct 1097 CGTGATCTCTTCTACGCGATGTGGATCCCCGATCTCTTCATGAAGCGCGTCGAGGCCAAC 1038 Query 112146 GGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGT-GGGTGA 112204 ||| | ||| || || || || || |||| || || |||| | | | ||| ||| || Sbjct 1037 GGCGAGTGGAGCCTGTTCTGCCCGAACGAGGCGCCGGGGCTCTAC-ACGACGTGGGGCGA 979 Query 112205 GGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGGTGCC 112264 ||||| || || || ||| |||||||| || | || ||| |||| | | Sbjct 978 CGAGTTCGAGGCGCTGTACCACCAGTACGAGCGCGAGGGCCGCGCGCGCAAGACGATCCG 919 Query 112265 AGCTGCCG-ATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATA 112323 || || | | | ||| || || ||| |||| || | |||||| || || || || | Sbjct 918 CGC-GCAGCAGCTCTGGTTCGCGATCCTCGAGTCGCAGATCGAGACAGGCACGCCGTACA 860 Query 112324 TGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGAT---CA 112380 |||| ||||| ||| | || |||| ||| || || |||| | || ||| | Sbjct 859 TGCTGTACAAGGACTCGTGCAACCGCAAGTCGAACCAGCAGAACCTCGGCACGATCCGCT 800 Query 112381 AGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGT 112440 ||| ||||||||| || | | || | || |||||| || |||| Sbjct 799 CGAG---CAACCTCTGCTGCGAGGTGCTCGAGTACACGTCGCCCGATGAGGTCGCGGTGT 743 Query 112441 GTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATT 112500 | |||||||| || ||||| || |||||| |||| || ||| ||||| ||||| | Sbjct 742 GCAACCTCGCGTCCATCGCGCTGTCCAAGTTTGTG--ACCGACGAC-AAGACCTTTGACT 686 Query 112501 ATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATA 112560 | || ||| |||| | || || ||||| ||||| |||| || || || | Sbjct 685 TCCAGAAGCTCTACGACATCACCAAGGTCGTCACGCGCAACCTGAACAAGGTCATCGACA 626 Query 112561 GAAATTTTTACCC---CGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTG 112617 || | ||||| | ||| | | || | || || | ||||| || || | Sbjct 625 TCAACTACTACCCGATCCCCGAGGCCGAGCGCA---GCAACCTGCGCCACCGCCCGATCG 569 Query 112618 GTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCG 112677 | |||| || || ||||||||||| | ||||| || || |||| || || || Sbjct 568 GCATCGGCGTGCAGGGTCTCGCGGACGCGTTCATCCTCATGGGCTACGCGTTCGAGAGCG 509 Query 112678 ACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGG 112737 |||| || || |||| | || || ||||| |||| | ||| | |||| Sbjct 508 ACGAGGCCCGCGAGCTCAACAAGAACATCTTCGAGACGCTGTACTTTGGCGCCATGGAGG 449 Query 112738 CGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTT 112797 | |||| | || || | || || || | | || |||||||| || | | Sbjct 448 CCTCGATGGAGCTCGCGCGGGAGCACGGCCCGTACGGCAGCTACGAGGGTTCGCCCG-TG 390 Query 112798 CACAAGGGGTGCTT-CAATTTGATATGTGGGAAGGTGA----GACCAAGCTTCACTACGA 112852 |||||| ||| || || || ||||||| || | ||| | || || || Sbjct 389 AGCAAGGGCATCTTCCAGTTCGACATGTGGG-GCGTCACGCCGACGTCGGGTCTCTGGGA 331 Query 112853 CTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGC 112912 ||||| ||| ||||||| || || | || | || | || ||| || || | || Sbjct 330 CTGGGCCGCGCTCAAGGCGAGCGTCGCGCAGTACGGCGTGCGCAACTCGCTGCTGCTCGC 271 Query 112913 ACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTA 112972 || ||||| || || || || || || ||| | || || || || | | || || | Sbjct 270 GCCGATGCCGACGGCGTCGACTGCGCAGATCCTCGGCAACAACGAGTCGATCGAGCCGTT 211 Query 112973 CACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCA 113032 |||||| ||||| || | | ||||| || ||||| ||| || |||||| | Sbjct 210 CACGACCAACATGTACAACCGCCGCGTGCTCGCTGGCGAGTTCACGATCGTGAACAAGTA 151 Query 113033 TCTCGTGGATGACCTCAAAGAGATTGGTCTCTGG 113066 ||| || | || |||| ||| | || ||||| Sbjct 150 CCTCATGAAGGAGCTCATCGAGCTCGGCATCTGG 117 >seq7871 Length=1281 Score = 158 bits (174), Expect = 1e-33 Identities = 201/274 (73%), Gaps = 2/274 (1%) Strand=Plus/Plus Query 102048 CTCATAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCTTTGAAGCCATCCAA 102107 ||||| |||| ||| || ||||| |||||||||| || || | |||||| | Sbjct 644 CTCATTGACACGTACATCAAGGACCAGACTGAGAAGAACCACCTTCTCCGCGCCATCGAG 703 Query 102108 ACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGATACAAAGTCG 102167 || | || || | || ||||| ||| | ||||| | ||||||| || | | || Sbjct 704 ACCATCCCGTGCGTGCAGAAGAAGGCGCACTGGGCGCTCAAGTGGTGCGACTCGC-GCCG 762 Query 102168 CGTTCCTTT-GCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGG 102226 || |||| |||||||| || | || || || ||| ||||||||||||||||| || Sbjct 763 CGCGGCTTTTGCTGAGCGCATCGTTGCGTTCGCTGCTGTCGAGGGTATCTTCTTCTCGGG 822 Query 102227 TTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTC 102286 || |||||| | || | |||||||||||||| ||||||||||| || ||| ||||||| Sbjct 823 CTCGTTCTGCTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGCCTCAGCTTCTC 882 Query 102287 CAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 102320 |||||||| ||||| || || ||||| |||||| Sbjct 883 GAACGAGCTCATCTCGCGCGATGAGGGCCTCCAC 916 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620272172113440